Gene : VIT_216s0098g01780 V. vinifera v2.1
Defline:  (1 of 1) PTHR12526//PTHR12526:SF17 - GLYCOSYLTRANSFERASE // STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  1342
Name:  ? VIT_216s0098g01780 Secondary Identifier:  ? PAC:38033315
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera GLYCOGENSYNTH-PWY Vitis vinifera pathologic  
Vvinifera PWY-622 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_216s0098g01780 0.5kb upstream 0.5kb upstream 6921 true chr16: 21844987-21851907 Vitis vinifera
VIT_216s0098g01780 0.5kb upstream 0.5kb upstream 500 false chr16: 21851408-21851907 Vitis vinifera
VIT_216s0098g01780 0.5kb downstream 0.5kb downstream 6921 true chr16: 21844487-21851407 Vitis vinifera
VIT_216s0098g01780 0.5kb downstream 0.5kb downstream 500 false chr16: 21844487-21844986 Vitis vinifera
VIT_216s0098g01780 1.0kb upstream 1.0kb upstream 7421 true chr16: 21844987-21852407 Vitis vinifera
VIT_216s0098g01780 1.0kb upstream 1.0kb upstream 1000 false chr16: 21851408-21852407 Vitis vinifera
VIT_216s0098g01780 1.0kb downstream 1.0kb downstream 7421 true chr16: 21843987-21851407 Vitis vinifera
VIT_216s0098g01780 1.0kb downstream 1.0kb downstream 1000 false chr16: 21843987-21844986 Vitis vinifera
VIT_216s0098g01780 2.0kb upstream 2.0kb upstream 8421 true chr16: 21844987-21853407 Vitis vinifera
VIT_216s0098g01780 2.0kb upstream 2.0kb upstream 2000 false chr16: 21851408-21853407 Vitis vinifera
VIT_216s0098g01780 2.0kb downstream 2.0kb downstream 8421 true chr16: 21842987-21851407 Vitis vinifera
VIT_216s0098g01780 2.0kb downstream 2.0kb downstream 2000 false chr16: 21842987-21844986 Vitis vinifera
VIT_216s0098g01780 5.0kb upstream 5.0kb upstream 11421 true chr16: 21844987-21856407 Vitis vinifera
VIT_216s0098g01780 5.0kb upstream 5.0kb upstream 5000 false chr16: 21851408-21856407 Vitis vinifera
VIT_216s0098g01780 5.0kb downstream 5.0kb downstream 11421 true chr16: 21839987-21851407 Vitis vinifera
VIT_216s0098g01780 5.0kb downstream 5.0kb downstream 5000 false chr16: 21839987-21844986 Vitis vinifera
VIT_216s0098g01780 10.0kb upstream 10.0kb upstream 16421 true chr16: 21844987-21861407 Vitis vinifera
VIT_216s0098g01780 10.0kb upstream 10.0kb upstream 10000 false chr16: 21851408-21861407 Vitis vinifera
VIT_216s0098g01780 10.0kb downstream 10.0kb downstream 16421 true chr16: 21834987-21851407 Vitis vinifera
VIT_216s0098g01780 10.0kb downstream 10.0kb downstream 10000 false chr16: 21834987-21844986 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060940 5270 Rosid View MSA
123737274 5271 Pentapetalae View MSA
122791286 5272 Eudicot View MSA
122042634 5273 Angiosperm View MSA
121343835 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain