Gene : VIT_206s0004g00420 V. vinifera v2.1

Defline:  (1 of 1) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  47
Name:  ? VIT_206s0004g00420 Secondary Identifier:  ? PAC:38061613

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_206s0004g00420 0.5kb upstream 0.5kb upstream 20952 true chr6: 562436-583387 Vitis vinifera
VIT_206s0004g00420 0.5kb upstream 0.5kb upstream 500 false chr6: 562436-562935 Vitis vinifera
VIT_206s0004g00420 0.5kb downstream 0.5kb downstream 20952 true chr6: 562936-583887 Vitis vinifera
VIT_206s0004g00420 0.5kb downstream 0.5kb downstream 500 false chr6: 583388-583887 Vitis vinifera
VIT_206s0004g00420 1.0kb upstream 1.0kb upstream 21452 true chr6: 561936-583387 Vitis vinifera
VIT_206s0004g00420 1.0kb upstream 1.0kb upstream 1000 false chr6: 561936-562935 Vitis vinifera
VIT_206s0004g00420 1.0kb downstream 1.0kb downstream 21452 true chr6: 562936-584387 Vitis vinifera
VIT_206s0004g00420 1.0kb downstream 1.0kb downstream 1000 false chr6: 583388-584387 Vitis vinifera
VIT_206s0004g00420 2.0kb upstream 2.0kb upstream 22452 true chr6: 560936-583387 Vitis vinifera
VIT_206s0004g00420 2.0kb upstream 2.0kb upstream 2000 false chr6: 560936-562935 Vitis vinifera
VIT_206s0004g00420 2.0kb downstream 2.0kb downstream 22452 true chr6: 562936-585387 Vitis vinifera
VIT_206s0004g00420 2.0kb downstream 2.0kb downstream 2000 false chr6: 583388-585387 Vitis vinifera
VIT_206s0004g00420 5.0kb upstream 5.0kb upstream 25452 true chr6: 557936-583387 Vitis vinifera
VIT_206s0004g00420 5.0kb upstream 5.0kb upstream 5000 false chr6: 557936-562935 Vitis vinifera
VIT_206s0004g00420 5.0kb downstream 5.0kb downstream 25452 true chr6: 562936-588387 Vitis vinifera
VIT_206s0004g00420 5.0kb downstream 5.0kb downstream 5000 false chr6: 583388-588387 Vitis vinifera
VIT_206s0004g00420 10.0kb upstream 10.0kb upstream 30452 true chr6: 552936-583387 Vitis vinifera
VIT_206s0004g00420 10.0kb upstream 10.0kb upstream 10000 false chr6: 552936-562935 Vitis vinifera
VIT_206s0004g00420 10.0kb downstream 10.0kb downstream 30452 true chr6: 562936-593387 Vitis vinifera
VIT_206s0004g00420 10.0kb downstream 10.0kb downstream 10000 false chr6: 583388-593387 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067858 5270 Rosid View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain