Gene : VIT_218s0001g03590 V. vinifera v2.1
Defline:  (1 of 2) PTHR11476//PTHR11476:SF7 - HISTIDYL-TRNA SYNTHETASE // HISTIDYL-TRNA SYNTHETASE, ISOFORM D Genomic Order:  131
Name:  ? VIT_218s0001g03590 Secondary Identifier:  ? PAC:38019270
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera TRNA-CHARGING-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_218s0001g03590 0.5kb upstream 0.5kb upstream 4510 true chr18_random: 3394601-3399110 Vitis vinifera
VIT_218s0001g03590 0.5kb upstream 0.5kb upstream 500 false chr18_random: 3398611-3399110 Vitis vinifera
VIT_218s0001g03590 0.5kb downstream 0.5kb downstream 4510 true chr18_random: 3394101-3398610 Vitis vinifera
VIT_218s0001g03590 0.5kb downstream 0.5kb downstream 500 false chr18_random: 3394101-3394600 Vitis vinifera
VIT_218s0001g03590 1.0kb upstream 1.0kb upstream 5010 true chr18_random: 3394601-3399610 Vitis vinifera
VIT_218s0001g03590 1.0kb upstream 1.0kb upstream 1000 false chr18_random: 3398611-3399610 Vitis vinifera
VIT_218s0001g03590 1.0kb downstream 1.0kb downstream 5010 true chr18_random: 3393601-3398610 Vitis vinifera
VIT_218s0001g03590 1.0kb downstream 1.0kb downstream 1000 false chr18_random: 3393601-3394600 Vitis vinifera
VIT_218s0001g03590 2.0kb upstream 2.0kb upstream 6010 true chr18_random: 3394601-3400610 Vitis vinifera
VIT_218s0001g03590 2.0kb upstream 2.0kb upstream 2000 false chr18_random: 3398611-3400610 Vitis vinifera
VIT_218s0001g03590 2.0kb downstream 2.0kb downstream 6010 true chr18_random: 3392601-3398610 Vitis vinifera
VIT_218s0001g03590 2.0kb downstream 2.0kb downstream 2000 false chr18_random: 3392601-3394600 Vitis vinifera
VIT_218s0001g03590 5.0kb upstream 5.0kb upstream 9010 true chr18_random: 3394601-3403610 Vitis vinifera
VIT_218s0001g03590 5.0kb upstream 5.0kb upstream 5000 false chr18_random: 3398611-3403610 Vitis vinifera
VIT_218s0001g03590 5.0kb downstream 5.0kb downstream 9010 true chr18_random: 3389601-3398610 Vitis vinifera
VIT_218s0001g03590 5.0kb downstream 5.0kb downstream 5000 false chr18_random: 3389601-3394600 Vitis vinifera
VIT_218s0001g03590 10.0kb upstream 10.0kb upstream 14010 true chr18_random: 3394601-3408610 Vitis vinifera
VIT_218s0001g03590 10.0kb upstream 10.0kb upstream 10000 false chr18_random: 3398611-3408610 Vitis vinifera
VIT_218s0001g03590 10.0kb downstream 10.0kb downstream 14010 true chr18_random: 3384601-3398610 Vitis vinifera
VIT_218s0001g03590 10.0kb downstream 10.0kb downstream 10000 false chr18_random: 3384601-3394600 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779866 5273 Angiosperm View MSA
124073900 5270 Rosid View MSA
123744374 5271 Pentapetalae View MSA
122771051 5272 Eudicot View MSA
121051502 5274 Embryophyte View MSA
123091588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain