Gene : VIT_202s0025g00370 V. vinifera v2.1
Defline:  (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Genomic Order:  49
Name:  ? VIT_202s0025g00370 Secondary Identifier:  ? PAC:38046631
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera PWY-7560 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_202s0025g00370 0.5kb upstream 0.5kb upstream 8188 true chr2: 479584-487771 Vitis vinifera
VIT_202s0025g00370 0.5kb upstream 0.5kb upstream 500 false chr2: 487272-487771 Vitis vinifera
VIT_202s0025g00370 0.5kb downstream 0.5kb downstream 8188 true chr2: 479084-487271 Vitis vinifera
VIT_202s0025g00370 0.5kb downstream 0.5kb downstream 500 false chr2: 479084-479583 Vitis vinifera
VIT_202s0025g00370 1.0kb upstream 1.0kb upstream 8688 true chr2: 479584-488271 Vitis vinifera
VIT_202s0025g00370 1.0kb upstream 1.0kb upstream 1000 false chr2: 487272-488271 Vitis vinifera
VIT_202s0025g00370 1.0kb downstream 1.0kb downstream 8688 true chr2: 478584-487271 Vitis vinifera
VIT_202s0025g00370 1.0kb downstream 1.0kb downstream 1000 false chr2: 478584-479583 Vitis vinifera
VIT_202s0025g00370 2.0kb upstream 2.0kb upstream 9688 true chr2: 479584-489271 Vitis vinifera
VIT_202s0025g00370 2.0kb upstream 2.0kb upstream 2000 false chr2: 487272-489271 Vitis vinifera
VIT_202s0025g00370 2.0kb downstream 2.0kb downstream 9688 true chr2: 477584-487271 Vitis vinifera
VIT_202s0025g00370 2.0kb downstream 2.0kb downstream 2000 false chr2: 477584-479583 Vitis vinifera
VIT_202s0025g00370 5.0kb upstream 5.0kb upstream 12688 true chr2: 479584-492271 Vitis vinifera
VIT_202s0025g00370 5.0kb upstream 5.0kb upstream 5000 false chr2: 487272-492271 Vitis vinifera
VIT_202s0025g00370 5.0kb downstream 5.0kb downstream 12688 true chr2: 474584-487271 Vitis vinifera
VIT_202s0025g00370 5.0kb downstream 5.0kb downstream 5000 false chr2: 474584-479583 Vitis vinifera
VIT_202s0025g00370 10.0kb upstream 10.0kb upstream 17688 true chr2: 479584-497271 Vitis vinifera
VIT_202s0025g00370 10.0kb upstream 10.0kb upstream 10000 false chr2: 487272-497271 Vitis vinifera
VIT_202s0025g00370 10.0kb downstream 10.0kb downstream 17688 true chr2: 469584-487271 Vitis vinifera
VIT_202s0025g00370 10.0kb downstream 10.0kb downstream 10000 false chr2: 469584-479583 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062148 5270 Rosid View MSA
123737612 5271 Pentapetalae View MSA
122786124 5272 Eudicot View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain