Gene : VIT_211s0016g01880 V. vinifera v2.1
Defline:  (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase Genomic Order:  170
Name:  ? VIT_211s0016g01880 Secondary Identifier:  ? PAC:38064857
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera CAROTENOID-PWY Vitis vinifera pathologic  
Vvinifera PWY-5175 Vitis vinifera pathologic  
Vvinifera PWY-5946 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_211s0016g01880 0.5kb upstream 0.5kb upstream 7041 true chr11: 1519660-1526700 Vitis vinifera
VIT_211s0016g01880 0.5kb upstream 0.5kb upstream 500 false chr11: 1526201-1526700 Vitis vinifera
VIT_211s0016g01880 0.5kb downstream 0.5kb downstream 7041 true chr11: 1519160-1526200 Vitis vinifera
VIT_211s0016g01880 0.5kb downstream 0.5kb downstream 500 false chr11: 1519160-1519659 Vitis vinifera
VIT_211s0016g01880 1.0kb upstream 1.0kb upstream 7541 true chr11: 1519660-1527200 Vitis vinifera
VIT_211s0016g01880 1.0kb upstream 1.0kb upstream 1000 false chr11: 1526201-1527200 Vitis vinifera
VIT_211s0016g01880 1.0kb downstream 1.0kb downstream 7541 true chr11: 1518660-1526200 Vitis vinifera
VIT_211s0016g01880 1.0kb downstream 1.0kb downstream 1000 false chr11: 1518660-1519659 Vitis vinifera
VIT_211s0016g01880 2.0kb upstream 2.0kb upstream 8541 true chr11: 1519660-1528200 Vitis vinifera
VIT_211s0016g01880 2.0kb upstream 2.0kb upstream 2000 false chr11: 1526201-1528200 Vitis vinifera
VIT_211s0016g01880 2.0kb downstream 2.0kb downstream 8541 true chr11: 1517660-1526200 Vitis vinifera
VIT_211s0016g01880 2.0kb downstream 2.0kb downstream 2000 false chr11: 1517660-1519659 Vitis vinifera
VIT_211s0016g01880 5.0kb upstream 5.0kb upstream 11541 true chr11: 1519660-1531200 Vitis vinifera
VIT_211s0016g01880 5.0kb upstream 5.0kb upstream 5000 false chr11: 1526201-1531200 Vitis vinifera
VIT_211s0016g01880 5.0kb downstream 5.0kb downstream 11541 true chr11: 1514660-1526200 Vitis vinifera
VIT_211s0016g01880 5.0kb downstream 5.0kb downstream 5000 false chr11: 1514660-1519659 Vitis vinifera
VIT_211s0016g01880 10.0kb upstream 10.0kb upstream 16541 true chr11: 1519660-1536200 Vitis vinifera
VIT_211s0016g01880 10.0kb upstream 10.0kb upstream 10000 false chr11: 1526201-1536200 Vitis vinifera
VIT_211s0016g01880 10.0kb downstream 10.0kb downstream 16541 true chr11: 1509660-1526200 Vitis vinifera
VIT_211s0016g01880 10.0kb downstream 10.0kb downstream 10000 false chr11: 1509660-1519659 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068333 5270 Rosid View MSA
123739919 5271 Pentapetalae View MSA
122791667 5272 Eudicot View MSA
122041543 5273 Angiosperm View MSA
121345455 5274 Embryophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain