Gene : VIT_212s0034g02380 V. vinifera v2.1
Defline:  (1 of 2) PTHR11680:SF7 - SERINE HYDROXYMETHYLTRANSFERASE 6-RELATED Genomic Order:  1284
Name:  ? VIT_212s0034g02380 Secondary Identifier:  ? PAC:38043550
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera GLYSYN-PWY Vitis vinifera pathologic  
Vvinifera PWY-2161 Vitis vinifera pathologic  
Vvinifera PWY-3841 Vitis vinifera pathologic  
Vvinifera SER-GLYSYN-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_212s0034g02380 0.5kb upstream 0.5kb upstream 13143 true chr12: 18843230-18856372 Vitis vinifera
VIT_212s0034g02380 0.5kb upstream 0.5kb upstream 500 false chr12: 18855873-18856372 Vitis vinifera
VIT_212s0034g02380 0.5kb downstream 0.5kb downstream 13143 true chr12: 18842730-18855872 Vitis vinifera
VIT_212s0034g02380 0.5kb downstream 0.5kb downstream 500 false chr12: 18842730-18843229 Vitis vinifera
VIT_212s0034g02380 1.0kb upstream 1.0kb upstream 13643 true chr12: 18843230-18856872 Vitis vinifera
VIT_212s0034g02380 1.0kb upstream 1.0kb upstream 1000 false chr12: 18855873-18856872 Vitis vinifera
VIT_212s0034g02380 1.0kb downstream 1.0kb downstream 13643 true chr12: 18842230-18855872 Vitis vinifera
VIT_212s0034g02380 1.0kb downstream 1.0kb downstream 1000 false chr12: 18842230-18843229 Vitis vinifera
VIT_212s0034g02380 2.0kb upstream 2.0kb upstream 14643 true chr12: 18843230-18857872 Vitis vinifera
VIT_212s0034g02380 2.0kb upstream 2.0kb upstream 2000 false chr12: 18855873-18857872 Vitis vinifera
VIT_212s0034g02380 2.0kb downstream 2.0kb downstream 14643 true chr12: 18841230-18855872 Vitis vinifera
VIT_212s0034g02380 2.0kb downstream 2.0kb downstream 2000 false chr12: 18841230-18843229 Vitis vinifera
VIT_212s0034g02380 5.0kb upstream 5.0kb upstream 17643 true chr12: 18843230-18860872 Vitis vinifera
VIT_212s0034g02380 5.0kb upstream 5.0kb upstream 5000 false chr12: 18855873-18860872 Vitis vinifera
VIT_212s0034g02380 5.0kb downstream 5.0kb downstream 17643 true chr12: 18838230-18855872 Vitis vinifera
VIT_212s0034g02380 5.0kb downstream 5.0kb downstream 5000 false chr12: 18838230-18843229 Vitis vinifera
VIT_212s0034g02380 10.0kb upstream 10.0kb upstream 22643 true chr12: 18843230-18865872 Vitis vinifera
VIT_212s0034g02380 10.0kb upstream 10.0kb upstream 10000 false chr12: 18855873-18865872 Vitis vinifera
VIT_212s0034g02380 10.0kb downstream 10.0kb downstream 22643 true chr12: 18833230-18855872 Vitis vinifera
VIT_212s0034g02380 10.0kb downstream 10.0kb downstream 10000 false chr12: 18833230-18843229 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069560 5270 Rosid View MSA
123741866 5271 Pentapetalae View MSA
122787051 5272 Eudicot View MSA
122046261 5273 Angiosperm View MSA
121345900 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain