Gene : VIT_212s0028g00960 V. vinifera v2.1
Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  89
Name:  ? VIT_212s0028g00960 Secondary Identifier:  ? PAC:38042344
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera CAROTENOID-PWY Vitis vinifera pathologic  
Vvinifera PWY-6475 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_212s0028g00960 0.5kb upstream 0.5kb upstream 3128 true chr12: 1467227-1470354 Vitis vinifera
VIT_212s0028g00960 0.5kb upstream 0.5kb upstream 500 false chr12: 1467227-1467726 Vitis vinifera
VIT_212s0028g00960 0.5kb downstream 0.5kb downstream 3128 true chr12: 1467727-1470854 Vitis vinifera
VIT_212s0028g00960 0.5kb downstream 0.5kb downstream 500 false chr12: 1470355-1470854 Vitis vinifera
VIT_212s0028g00960 1.0kb upstream 1.0kb upstream 3628 true chr12: 1466727-1470354 Vitis vinifera
VIT_212s0028g00960 1.0kb upstream 1.0kb upstream 1000 false chr12: 1466727-1467726 Vitis vinifera
VIT_212s0028g00960 1.0kb downstream 1.0kb downstream 3628 true chr12: 1467727-1471354 Vitis vinifera
VIT_212s0028g00960 1.0kb downstream 1.0kb downstream 1000 false chr12: 1470355-1471354 Vitis vinifera
VIT_212s0028g00960 2.0kb upstream 2.0kb upstream 4628 true chr12: 1465727-1470354 Vitis vinifera
VIT_212s0028g00960 2.0kb upstream 2.0kb upstream 2000 false chr12: 1465727-1467726 Vitis vinifera
VIT_212s0028g00960 2.0kb downstream 2.0kb downstream 4628 true chr12: 1467727-1472354 Vitis vinifera
VIT_212s0028g00960 2.0kb downstream 2.0kb downstream 2000 false chr12: 1470355-1472354 Vitis vinifera
VIT_212s0028g00960 5.0kb upstream 5.0kb upstream 7628 true chr12: 1462727-1470354 Vitis vinifera
VIT_212s0028g00960 5.0kb upstream 5.0kb upstream 5000 false chr12: 1462727-1467726 Vitis vinifera
VIT_212s0028g00960 5.0kb downstream 5.0kb downstream 7628 true chr12: 1467727-1475354 Vitis vinifera
VIT_212s0028g00960 5.0kb downstream 5.0kb downstream 5000 false chr12: 1470355-1475354 Vitis vinifera
VIT_212s0028g00960 10.0kb upstream 10.0kb upstream 12628 true chr12: 1457727-1470354 Vitis vinifera
VIT_212s0028g00960 10.0kb upstream 10.0kb upstream 10000 false chr12: 1457727-1467726 Vitis vinifera
VIT_212s0028g00960 10.0kb downstream 10.0kb downstream 12628 true chr12: 1467727-1480354 Vitis vinifera
VIT_212s0028g00960 10.0kb downstream 10.0kb downstream 10000 false chr12: 1470355-1480354 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain