Gene : VIT_218s0001g00190 V. vinifera v2.1

Defline:  (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  132
Name:  ? VIT_218s0001g00190 Secondary Identifier:  ? PAC:38039887

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_218s0001g00190 0.5kb upstream 0.5kb upstream 3367 true chr18: 1214938-1218304 Vitis vinifera
VIT_218s0001g00190 0.5kb upstream 0.5kb upstream 500 false chr18: 1217805-1218304 Vitis vinifera
VIT_218s0001g00190 0.5kb downstream 0.5kb downstream 3367 true chr18: 1214438-1217804 Vitis vinifera
VIT_218s0001g00190 0.5kb downstream 0.5kb downstream 500 false chr18: 1214438-1214937 Vitis vinifera
VIT_218s0001g00190 1.0kb upstream 1.0kb upstream 3867 true chr18: 1214938-1218804 Vitis vinifera
VIT_218s0001g00190 1.0kb upstream 1.0kb upstream 1000 false chr18: 1217805-1218804 Vitis vinifera
VIT_218s0001g00190 1.0kb downstream 1.0kb downstream 3867 true chr18: 1213938-1217804 Vitis vinifera
VIT_218s0001g00190 1.0kb downstream 1.0kb downstream 1000 false chr18: 1213938-1214937 Vitis vinifera
VIT_218s0001g00190 2.0kb upstream 2.0kb upstream 4867 true chr18: 1214938-1219804 Vitis vinifera
VIT_218s0001g00190 2.0kb upstream 2.0kb upstream 2000 false chr18: 1217805-1219804 Vitis vinifera
VIT_218s0001g00190 2.0kb downstream 2.0kb downstream 4867 true chr18: 1212938-1217804 Vitis vinifera
VIT_218s0001g00190 2.0kb downstream 2.0kb downstream 2000 false chr18: 1212938-1214937 Vitis vinifera
VIT_218s0001g00190 5.0kb upstream 5.0kb upstream 7867 true chr18: 1214938-1222804 Vitis vinifera
VIT_218s0001g00190 5.0kb upstream 5.0kb upstream 5000 false chr18: 1217805-1222804 Vitis vinifera
VIT_218s0001g00190 5.0kb downstream 5.0kb downstream 7867 true chr18: 1209938-1217804 Vitis vinifera
VIT_218s0001g00190 5.0kb downstream 5.0kb downstream 5000 false chr18: 1209938-1214937 Vitis vinifera
VIT_218s0001g00190 10.0kb upstream 10.0kb upstream 12867 true chr18: 1214938-1227804 Vitis vinifera
VIT_218s0001g00190 10.0kb upstream 10.0kb upstream 10000 false chr18: 1217805-1227804 Vitis vinifera
VIT_218s0001g00190 10.0kb downstream 10.0kb downstream 12867 true chr18: 1204938-1217804 Vitis vinifera
VIT_218s0001g00190 10.0kb downstream 10.0kb downstream 10000 false chr18: 1204938-1214937 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain