Gene : VIT_218s0001g12780 V. vinifera v2.1
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  1086
Name:  ? VIT_218s0001g12780 Secondary Identifier:  ? PAC:38039842
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera ARGSYNBSUB-PWY Vitis vinifera pathologic  
Vvinifera ARGSYN-PWY Vitis vinifera pathologic  
Vvinifera CITRULBIO-PWY Vitis vinifera pathologic  
Vvinifera CITRULLINE-DEG-PWY Vitis vinifera pathologic  
Vvinifera PWY-4984 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_218s0001g12780 0.5kb upstream 0.5kb upstream 12471 true chr18: 10891362-10903832 Vitis vinifera
VIT_218s0001g12780 0.5kb upstream 0.5kb upstream 500 false chr18: 10903333-10903832 Vitis vinifera
VIT_218s0001g12780 0.5kb downstream 0.5kb downstream 12471 true chr18: 10890862-10903332 Vitis vinifera
VIT_218s0001g12780 0.5kb downstream 0.5kb downstream 500 false chr18: 10890862-10891361 Vitis vinifera
VIT_218s0001g12780 1.0kb upstream 1.0kb upstream 12971 true chr18: 10891362-10904332 Vitis vinifera
VIT_218s0001g12780 1.0kb upstream 1.0kb upstream 1000 false chr18: 10903333-10904332 Vitis vinifera
VIT_218s0001g12780 1.0kb downstream 1.0kb downstream 12971 true chr18: 10890362-10903332 Vitis vinifera
VIT_218s0001g12780 1.0kb downstream 1.0kb downstream 1000 false chr18: 10890362-10891361 Vitis vinifera
VIT_218s0001g12780 2.0kb upstream 2.0kb upstream 13971 true chr18: 10891362-10905332 Vitis vinifera
VIT_218s0001g12780 2.0kb upstream 2.0kb upstream 2000 false chr18: 10903333-10905332 Vitis vinifera
VIT_218s0001g12780 2.0kb downstream 2.0kb downstream 13971 true chr18: 10889362-10903332 Vitis vinifera
VIT_218s0001g12780 2.0kb downstream 2.0kb downstream 2000 false chr18: 10889362-10891361 Vitis vinifera
VIT_218s0001g12780 5.0kb upstream 5.0kb upstream 16971 true chr18: 10891362-10908332 Vitis vinifera
VIT_218s0001g12780 5.0kb upstream 5.0kb upstream 5000 false chr18: 10903333-10908332 Vitis vinifera
VIT_218s0001g12780 5.0kb downstream 5.0kb downstream 16971 true chr18: 10886362-10903332 Vitis vinifera
VIT_218s0001g12780 5.0kb downstream 5.0kb downstream 5000 false chr18: 10886362-10891361 Vitis vinifera
VIT_218s0001g12780 10.0kb upstream 10.0kb upstream 21971 true chr18: 10891362-10913332 Vitis vinifera
VIT_218s0001g12780 10.0kb upstream 10.0kb upstream 10000 false chr18: 10903333-10913332 Vitis vinifera
VIT_218s0001g12780 10.0kb downstream 10.0kb downstream 21971 true chr18: 10881362-10903332 Vitis vinifera
VIT_218s0001g12780 10.0kb downstream 10.0kb downstream 10000 false chr18: 10881362-10891361 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain