Gene : VIT_218s0122g00960 V. vinifera v2.1
Defline:  (1 of 1) PTHR10836:SF39 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC Genomic Order:  73
Name:  ? VIT_218s0122g00960 Secondary Identifier:  ? PAC:38039769
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera ANAEROFRUCAT-PWY Vitis vinifera pathologic  
Vvinifera ANAGLYCOLYSIS-PWY Vitis vinifera pathologic  
Vvinifera CALVIN-PWY Vitis vinifera pathologic  
Vvinifera GLUCONEO-PWY Vitis vinifera pathologic  
Vvinifera PHOTOALL-PWY Vitis vinifera pathologic  
Vvinifera PWY-1042 Vitis vinifera pathologic  
Vvinifera PWY-5464 Vitis vinifera pathologic  
Vvinifera PWY66-399 Vitis vinifera pathologic  
Vvinifera SUCSYN-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_218s0122g00960 0.5kb upstream 0.5kb upstream 3439 true chr18: 680831-684269 Vitis vinifera
VIT_218s0122g00960 0.5kb upstream 0.5kb upstream 500 false chr18: 680831-681330 Vitis vinifera
VIT_218s0122g00960 0.5kb downstream 0.5kb downstream 3439 true chr18: 681331-684769 Vitis vinifera
VIT_218s0122g00960 0.5kb downstream 0.5kb downstream 500 false chr18: 684270-684769 Vitis vinifera
VIT_218s0122g00960 1.0kb upstream 1.0kb upstream 3939 true chr18: 680331-684269 Vitis vinifera
VIT_218s0122g00960 1.0kb upstream 1.0kb upstream 1000 false chr18: 680331-681330 Vitis vinifera
VIT_218s0122g00960 1.0kb downstream 1.0kb downstream 3939 true chr18: 681331-685269 Vitis vinifera
VIT_218s0122g00960 1.0kb downstream 1.0kb downstream 1000 false chr18: 684270-685269 Vitis vinifera
VIT_218s0122g00960 2.0kb upstream 2.0kb upstream 4939 true chr18: 679331-684269 Vitis vinifera
VIT_218s0122g00960 2.0kb upstream 2.0kb upstream 2000 false chr18: 679331-681330 Vitis vinifera
VIT_218s0122g00960 2.0kb downstream 2.0kb downstream 4939 true chr18: 681331-686269 Vitis vinifera
VIT_218s0122g00960 2.0kb downstream 2.0kb downstream 2000 false chr18: 684270-686269 Vitis vinifera
VIT_218s0122g00960 5.0kb upstream 5.0kb upstream 7939 true chr18: 676331-684269 Vitis vinifera
VIT_218s0122g00960 5.0kb upstream 5.0kb upstream 5000 false chr18: 676331-681330 Vitis vinifera
VIT_218s0122g00960 5.0kb downstream 5.0kb downstream 7939 true chr18: 681331-689269 Vitis vinifera
VIT_218s0122g00960 5.0kb downstream 5.0kb downstream 5000 false chr18: 684270-689269 Vitis vinifera
VIT_218s0122g00960 10.0kb upstream 10.0kb upstream 12939 true chr18: 671331-684269 Vitis vinifera
VIT_218s0122g00960 10.0kb upstream 10.0kb upstream 10000 false chr18: 671331-681330 Vitis vinifera
VIT_218s0122g00960 10.0kb downstream 10.0kb downstream 12939 true chr18: 681331-694269 Vitis vinifera
VIT_218s0122g00960 10.0kb downstream 10.0kb downstream 10000 false chr18: 684270-694269 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062072 5270 Rosid View MSA
123746514 5271 Pentapetalae View MSA
122796484 5272 Eudicot View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain