Gene : VIT_204s0008g02290 V. vinifera v2.1
Defline:  (1 of 1) PTHR22763:SF50 - E3 UBIQUITIN-PROTEIN LIGASE AIP2 Genomic Order:  214
Name:  ? VIT_204s0008g02290 Secondary Identifier:  ? PAC:38069076
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera PWY-7511 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_204s0008g02290 0.5kb upstream 0.5kb upstream 2735 true chr4: 1889536-1892270 Vitis vinifera
VIT_204s0008g02290 0.5kb upstream 0.5kb upstream 500 false chr4: 1891771-1892270 Vitis vinifera
VIT_204s0008g02290 0.5kb downstream 0.5kb downstream 2735 true chr4: 1889036-1891770 Vitis vinifera
VIT_204s0008g02290 0.5kb downstream 0.5kb downstream 500 false chr4: 1889036-1889535 Vitis vinifera
VIT_204s0008g02290 1.0kb upstream 1.0kb upstream 3235 true chr4: 1889536-1892770 Vitis vinifera
VIT_204s0008g02290 1.0kb upstream 1.0kb upstream 1000 false chr4: 1891771-1892770 Vitis vinifera
VIT_204s0008g02290 1.0kb downstream 1.0kb downstream 3235 true chr4: 1888536-1891770 Vitis vinifera
VIT_204s0008g02290 1.0kb downstream 1.0kb downstream 1000 false chr4: 1888536-1889535 Vitis vinifera
VIT_204s0008g02290 2.0kb upstream 2.0kb upstream 4235 true chr4: 1889536-1893770 Vitis vinifera
VIT_204s0008g02290 2.0kb upstream 2.0kb upstream 2000 false chr4: 1891771-1893770 Vitis vinifera
VIT_204s0008g02290 2.0kb downstream 2.0kb downstream 4235 true chr4: 1887536-1891770 Vitis vinifera
VIT_204s0008g02290 2.0kb downstream 2.0kb downstream 2000 false chr4: 1887536-1889535 Vitis vinifera
VIT_204s0008g02290 5.0kb upstream 5.0kb upstream 7235 true chr4: 1889536-1896770 Vitis vinifera
VIT_204s0008g02290 5.0kb upstream 5.0kb upstream 5000 false chr4: 1891771-1896770 Vitis vinifera
VIT_204s0008g02290 5.0kb downstream 5.0kb downstream 7235 true chr4: 1884536-1891770 Vitis vinifera
VIT_204s0008g02290 5.0kb downstream 5.0kb downstream 5000 false chr4: 1884536-1889535 Vitis vinifera
VIT_204s0008g02290 10.0kb upstream 10.0kb upstream 12235 true chr4: 1889536-1901770 Vitis vinifera
VIT_204s0008g02290 10.0kb upstream 10.0kb upstream 10000 false chr4: 1891771-1901770 Vitis vinifera
VIT_204s0008g02290 10.0kb downstream 10.0kb downstream 12235 true chr4: 1879536-1891770 Vitis vinifera
VIT_204s0008g02290 10.0kb downstream 10.0kb downstream 10000 false chr4: 1879536-1889535 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
124060743 5270 Rosid View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain