Gene : VIT_205s0020g01550 V. vinifera v2.1
Defline:  (1 of 1) PTHR11946:SF82 - ISOLEUCINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  378
Name:  ? VIT_205s0020g01550 Secondary Identifier:  ? PAC:38073381
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera TRNA-CHARGING-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_205s0020g01550 0.5kb upstream 0.5kb upstream 26274 true chr5: 3218495-3244768 Vitis vinifera
VIT_205s0020g01550 0.5kb upstream 0.5kb upstream 500 false chr5: 3244269-3244768 Vitis vinifera
VIT_205s0020g01550 0.5kb downstream 0.5kb downstream 26274 true chr5: 3217995-3244268 Vitis vinifera
VIT_205s0020g01550 0.5kb downstream 0.5kb downstream 500 false chr5: 3217995-3218494 Vitis vinifera
VIT_205s0020g01550 1.0kb upstream 1.0kb upstream 26774 true chr5: 3218495-3245268 Vitis vinifera
VIT_205s0020g01550 1.0kb upstream 1.0kb upstream 1000 false chr5: 3244269-3245268 Vitis vinifera
VIT_205s0020g01550 1.0kb downstream 1.0kb downstream 26774 true chr5: 3217495-3244268 Vitis vinifera
VIT_205s0020g01550 1.0kb downstream 1.0kb downstream 1000 false chr5: 3217495-3218494 Vitis vinifera
VIT_205s0020g01550 2.0kb upstream 2.0kb upstream 27774 true chr5: 3218495-3246268 Vitis vinifera
VIT_205s0020g01550 2.0kb upstream 2.0kb upstream 2000 false chr5: 3244269-3246268 Vitis vinifera
VIT_205s0020g01550 2.0kb downstream 2.0kb downstream 27774 true chr5: 3216495-3244268 Vitis vinifera
VIT_205s0020g01550 2.0kb downstream 2.0kb downstream 2000 false chr5: 3216495-3218494 Vitis vinifera
VIT_205s0020g01550 5.0kb upstream 5.0kb upstream 30774 true chr5: 3218495-3249268 Vitis vinifera
VIT_205s0020g01550 5.0kb upstream 5.0kb upstream 5000 false chr5: 3244269-3249268 Vitis vinifera
VIT_205s0020g01550 5.0kb downstream 5.0kb downstream 30774 true chr5: 3213495-3244268 Vitis vinifera
VIT_205s0020g01550 5.0kb downstream 5.0kb downstream 5000 false chr5: 3213495-3218494 Vitis vinifera
VIT_205s0020g01550 10.0kb upstream 10.0kb upstream 35774 true chr5: 3218495-3254268 Vitis vinifera
VIT_205s0020g01550 10.0kb upstream 10.0kb upstream 10000 false chr5: 3244269-3254268 Vitis vinifera
VIT_205s0020g01550 10.0kb downstream 10.0kb downstream 35774 true chr5: 3208495-3244268 Vitis vinifera
VIT_205s0020g01550 10.0kb downstream 10.0kb downstream 10000 false chr5: 3208495-3218494 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain