Gene : VIT_205s0020g02030 V. vinifera v2.1
Defline:  (1 of 2) PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  427
Name:  ? VIT_205s0020g02030 Secondary Identifier:  ? PAC:38073014
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera ARO-PWY Vitis vinifera pathologic  
Vvinifera PWY-6163 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_205s0020g02030 0.5kb upstream 0.5kb upstream 31569 true chr5: 3759597-3791165 Vitis vinifera
VIT_205s0020g02030 0.5kb upstream 0.5kb upstream 500 false chr5: 3759597-3760096 Vitis vinifera
VIT_205s0020g02030 0.5kb downstream 0.5kb downstream 31569 true chr5: 3760097-3791665 Vitis vinifera
VIT_205s0020g02030 0.5kb downstream 0.5kb downstream 500 false chr5: 3791166-3791665 Vitis vinifera
VIT_205s0020g02030 1.0kb upstream 1.0kb upstream 32069 true chr5: 3759097-3791165 Vitis vinifera
VIT_205s0020g02030 1.0kb upstream 1.0kb upstream 1000 false chr5: 3759097-3760096 Vitis vinifera
VIT_205s0020g02030 1.0kb downstream 1.0kb downstream 32069 true chr5: 3760097-3792165 Vitis vinifera
VIT_205s0020g02030 1.0kb downstream 1.0kb downstream 1000 false chr5: 3791166-3792165 Vitis vinifera
VIT_205s0020g02030 2.0kb upstream 2.0kb upstream 33069 true chr5: 3758097-3791165 Vitis vinifera
VIT_205s0020g02030 2.0kb upstream 2.0kb upstream 2000 false chr5: 3758097-3760096 Vitis vinifera
VIT_205s0020g02030 2.0kb downstream 2.0kb downstream 33069 true chr5: 3760097-3793165 Vitis vinifera
VIT_205s0020g02030 2.0kb downstream 2.0kb downstream 2000 false chr5: 3791166-3793165 Vitis vinifera
VIT_205s0020g02030 5.0kb upstream 5.0kb upstream 36069 true chr5: 3755097-3791165 Vitis vinifera
VIT_205s0020g02030 5.0kb upstream 5.0kb upstream 5000 false chr5: 3755097-3760096 Vitis vinifera
VIT_205s0020g02030 5.0kb downstream 5.0kb downstream 36069 true chr5: 3760097-3796165 Vitis vinifera
VIT_205s0020g02030 5.0kb downstream 5.0kb downstream 5000 false chr5: 3791166-3796165 Vitis vinifera
VIT_205s0020g02030 10.0kb upstream 10.0kb upstream 41069 true chr5: 3750097-3791165 Vitis vinifera
VIT_205s0020g02030 10.0kb upstream 10.0kb upstream 10000 false chr5: 3750097-3760096 Vitis vinifera
VIT_205s0020g02030 10.0kb downstream 10.0kb downstream 41069 true chr5: 3760097-3801165 Vitis vinifera
VIT_205s0020g02030 10.0kb downstream 10.0kb downstream 10000 false chr5: 3791166-3801165 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain