Gene : VIT_205s0077g01870 V. vinifera v2.1
Defline:  (1 of 1) PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Genomic Order:  173
Name:  ? VIT_205s0077g01870 Secondary Identifier:  ? PAC:38072802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_205s0077g01870 0.5kb upstream 0.5kb upstream 2698 true chr5: 1470097-1472794 Vitis vinifera
VIT_205s0077g01870 0.5kb upstream 0.5kb upstream 500 false chr5: 1472295-1472794 Vitis vinifera
VIT_205s0077g01870 0.5kb downstream 0.5kb downstream 2698 true chr5: 1469597-1472294 Vitis vinifera
VIT_205s0077g01870 0.5kb downstream 0.5kb downstream 500 false chr5: 1469597-1470096 Vitis vinifera
VIT_205s0077g01870 1.0kb upstream 1.0kb upstream 3198 true chr5: 1470097-1473294 Vitis vinifera
VIT_205s0077g01870 1.0kb upstream 1.0kb upstream 1000 false chr5: 1472295-1473294 Vitis vinifera
VIT_205s0077g01870 1.0kb downstream 1.0kb downstream 3198 true chr5: 1469097-1472294 Vitis vinifera
VIT_205s0077g01870 1.0kb downstream 1.0kb downstream 1000 false chr5: 1469097-1470096 Vitis vinifera
VIT_205s0077g01870 2.0kb upstream 2.0kb upstream 4198 true chr5: 1470097-1474294 Vitis vinifera
VIT_205s0077g01870 2.0kb upstream 2.0kb upstream 2000 false chr5: 1472295-1474294 Vitis vinifera
VIT_205s0077g01870 2.0kb downstream 2.0kb downstream 4198 true chr5: 1468097-1472294 Vitis vinifera
VIT_205s0077g01870 2.0kb downstream 2.0kb downstream 2000 false chr5: 1468097-1470096 Vitis vinifera
VIT_205s0077g01870 5.0kb upstream 5.0kb upstream 7198 true chr5: 1470097-1477294 Vitis vinifera
VIT_205s0077g01870 5.0kb upstream 5.0kb upstream 5000 false chr5: 1472295-1477294 Vitis vinifera
VIT_205s0077g01870 5.0kb downstream 5.0kb downstream 7198 true chr5: 1465097-1472294 Vitis vinifera
VIT_205s0077g01870 5.0kb downstream 5.0kb downstream 5000 false chr5: 1465097-1470096 Vitis vinifera
VIT_205s0077g01870 10.0kb upstream 10.0kb upstream 12198 true chr5: 1470097-1482294 Vitis vinifera
VIT_205s0077g01870 10.0kb upstream 10.0kb upstream 10000 false chr5: 1472295-1482294 Vitis vinifera
VIT_205s0077g01870 10.0kb downstream 10.0kb downstream 12198 true chr5: 1460097-1472294 Vitis vinifera
VIT_205s0077g01870 10.0kb downstream 10.0kb downstream 10000 false chr5: 1460097-1470096 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026696 5273 Angiosperm View MSA
124069433 5270 Rosid View MSA
123746924 5271 Pentapetalae View MSA
122794448 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121348213 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain