Gene : VIT_200s0211g00120 V. vinifera v2.1
Defline:  (1 of 8) K00600 - glycine hydroxymethyltransferase (glyA, SHMT) Genomic Order:  674
Name:  ? VIT_200s0211g00120 Secondary Identifier:  ? PAC:38048074
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera GLYSYN-PWY Vitis vinifera pathologic  
Vvinifera PWY-2161 Vitis vinifera pathologic  
Vvinifera PWY-3841 Vitis vinifera pathologic  
Vvinifera SER-GLYSYN-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_200s0211g00120 0.5kb upstream 0.5kb upstream 6648 true chrUn: 12953503-12960150 Vitis vinifera
VIT_200s0211g00120 0.5kb upstream 0.5kb upstream 500 false chrUn: 12959651-12960150 Vitis vinifera
VIT_200s0211g00120 0.5kb downstream 0.5kb downstream 6648 true chrUn: 12953003-12959650 Vitis vinifera
VIT_200s0211g00120 0.5kb downstream 0.5kb downstream 500 false chrUn: 12953003-12953502 Vitis vinifera
VIT_200s0211g00120 1.0kb upstream 1.0kb upstream 7148 true chrUn: 12953503-12960650 Vitis vinifera
VIT_200s0211g00120 1.0kb upstream 1.0kb upstream 1000 false chrUn: 12959651-12960650 Vitis vinifera
VIT_200s0211g00120 1.0kb downstream 1.0kb downstream 7148 true chrUn: 12952503-12959650 Vitis vinifera
VIT_200s0211g00120 1.0kb downstream 1.0kb downstream 1000 false chrUn: 12952503-12953502 Vitis vinifera
VIT_200s0211g00120 2.0kb upstream 2.0kb upstream 8148 true chrUn: 12953503-12961650 Vitis vinifera
VIT_200s0211g00120 2.0kb upstream 2.0kb upstream 2000 false chrUn: 12959651-12961650 Vitis vinifera
VIT_200s0211g00120 2.0kb downstream 2.0kb downstream 8148 true chrUn: 12951503-12959650 Vitis vinifera
VIT_200s0211g00120 2.0kb downstream 2.0kb downstream 2000 false chrUn: 12951503-12953502 Vitis vinifera
VIT_200s0211g00120 5.0kb upstream 5.0kb upstream 11148 true chrUn: 12953503-12964650 Vitis vinifera
VIT_200s0211g00120 5.0kb upstream 5.0kb upstream 5000 false chrUn: 12959651-12964650 Vitis vinifera
VIT_200s0211g00120 5.0kb downstream 5.0kb downstream 11148 true chrUn: 12948503-12959650 Vitis vinifera
VIT_200s0211g00120 5.0kb downstream 5.0kb downstream 5000 false chrUn: 12948503-12953502 Vitis vinifera
VIT_200s0211g00120 10.0kb upstream 10.0kb upstream 16148 true chrUn: 12953503-12969650 Vitis vinifera
VIT_200s0211g00120 10.0kb upstream 10.0kb upstream 10000 false chrUn: 12959651-12969650 Vitis vinifera
VIT_200s0211g00120 10.0kb downstream 10.0kb downstream 16148 true chrUn: 12943503-12959650 Vitis vinifera
VIT_200s0211g00120 10.0kb downstream 10.0kb downstream 10000 false chrUn: 12943503-12953502 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain