Gene : VIT_200s0275g00010 V. vinifera v2.1
Defline:  (1 of 3) K02706 - photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  1196
Name:  ? VIT_200s0275g00010 Secondary Identifier:  ? PAC:38047443
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera PHOTOALL-PWY Vitis vinifera pathologic  
Vvinifera PWY-101 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_200s0275g00010 0.5kb upstream 0.5kb upstream 713 true chrUn: 20454587-20455299 Vitis vinifera
VIT_200s0275g00010 0.5kb upstream 0.5kb upstream 500 false chrUn: 20454587-20455086 Vitis vinifera
VIT_200s0275g00010 0.5kb downstream 0.5kb downstream 713 true chrUn: 20455087-20455799 Vitis vinifera
VIT_200s0275g00010 0.5kb downstream 0.5kb downstream 500 false chrUn: 20455300-20455799 Vitis vinifera
VIT_200s0275g00010 1.0kb upstream 1.0kb upstream 1213 true chrUn: 20454087-20455299 Vitis vinifera
VIT_200s0275g00010 1.0kb upstream 1.0kb upstream 1000 false chrUn: 20454087-20455086 Vitis vinifera
VIT_200s0275g00010 1.0kb downstream 1.0kb downstream 1213 true chrUn: 20455087-20456299 Vitis vinifera
VIT_200s0275g00010 1.0kb downstream 1.0kb downstream 1000 false chrUn: 20455300-20456299 Vitis vinifera
VIT_200s0275g00010 2.0kb upstream 2.0kb upstream 2213 true chrUn: 20453087-20455299 Vitis vinifera
VIT_200s0275g00010 2.0kb upstream 2.0kb upstream 2000 false chrUn: 20453087-20455086 Vitis vinifera
VIT_200s0275g00010 2.0kb downstream 2.0kb downstream 2213 true chrUn: 20455087-20457299 Vitis vinifera
VIT_200s0275g00010 2.0kb downstream 2.0kb downstream 2000 false chrUn: 20455300-20457299 Vitis vinifera
VIT_200s0275g00010 5.0kb upstream 5.0kb upstream 5213 true chrUn: 20450087-20455299 Vitis vinifera
VIT_200s0275g00010 5.0kb upstream 5.0kb upstream 5000 false chrUn: 20450087-20455086 Vitis vinifera
VIT_200s0275g00010 5.0kb downstream 5.0kb downstream 5213 true chrUn: 20455087-20460299 Vitis vinifera
VIT_200s0275g00010 5.0kb downstream 5.0kb downstream 5000 false chrUn: 20455300-20460299 Vitis vinifera
VIT_200s0275g00010 10.0kb upstream 10.0kb upstream 10213 true chrUn: 20445087-20455299 Vitis vinifera
VIT_200s0275g00010 10.0kb upstream 10.0kb upstream 10000 false chrUn: 20445087-20455086 Vitis vinifera
VIT_200s0275g00010 10.0kb downstream 10.0kb downstream 10213 true chrUn: 20455087-20465299 Vitis vinifera
VIT_200s0275g00010 10.0kb downstream 10.0kb downstream 10000 false chrUn: 20455300-20465299 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073414 5270 Rosid View MSA
123753260 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain