Gene : 30076.t000109 R. communis v0.1
Defline:  (1 of 1) PTHR10742:SF294 - PROTOPORPHYRINOGEN OXIDASE 1, CHLOROPLASTIC Genomic Order:  108
Name:  ? 30076.t000109 Secondary Identifier:  ? PAC:16817157
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis CHLOROPHYLL-SYN Ricinus communis pathologic  
Rcommunis HEME-BIOSYNTHESIS-II Ricinus communis pathologic  
Rcommunis PWY-5918 Ricinus communis pathologic  
Rcommunis PWY-7159 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30076.t000109 0.5kb upstream 0.5kb upstream 4235 true 30076: 653983-658217 Ricinus communis
30076.t000109 0.5kb upstream 0.5kb upstream 500 false 30076: 653983-654482 Ricinus communis
30076.t000109 0.5kb downstream 0.5kb downstream 4235 true 30076: 654483-658717 Ricinus communis
30076.t000109 0.5kb downstream 0.5kb downstream 500 false 30076: 658218-658717 Ricinus communis
30076.t000109 1.0kb upstream 1.0kb upstream 4735 true 30076: 653483-658217 Ricinus communis
30076.t000109 1.0kb upstream 1.0kb upstream 1000 false 30076: 653483-654482 Ricinus communis
30076.t000109 1.0kb downstream 1.0kb downstream 4735 true 30076: 654483-659217 Ricinus communis
30076.t000109 1.0kb downstream 1.0kb downstream 1000 false 30076: 658218-659217 Ricinus communis
30076.t000109 2.0kb upstream 2.0kb upstream 5735 true 30076: 652483-658217 Ricinus communis
30076.t000109 2.0kb upstream 2.0kb upstream 2000 false 30076: 652483-654482 Ricinus communis
30076.t000109 2.0kb downstream 2.0kb downstream 5735 true 30076: 654483-660217 Ricinus communis
30076.t000109 2.0kb downstream 2.0kb downstream 2000 false 30076: 658218-660217 Ricinus communis
30076.t000109 5.0kb upstream 5.0kb upstream 8735 true 30076: 649483-658217 Ricinus communis
30076.t000109 5.0kb upstream 5.0kb upstream 5000 false 30076: 649483-654482 Ricinus communis
30076.t000109 5.0kb downstream 5.0kb downstream 8735 true 30076: 654483-663217 Ricinus communis
30076.t000109 5.0kb downstream 5.0kb downstream 5000 false 30076: 658218-663217 Ricinus communis
30076.t000109 10.0kb upstream 10.0kb upstream 13735 true 30076: 644483-658217 Ricinus communis
30076.t000109 10.0kb upstream 10.0kb upstream 10000 false 30076: 644483-654482 Ricinus communis
30076.t000109 10.0kb downstream 10.0kb downstream 13735 true 30076: 654483-668217 Ricinus communis
30076.t000109 10.0kb downstream 10.0kb downstream 10000 false 30076: 658218-668217 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452263 5262 Malpighiales View MSA
124242274 5268 Malvidae View MSA
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain