Gene : 30076.t000155 R. communis v0.1
Defline:  (1 of 1) PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  154
Name:  ? 30076.t000155 Secondary Identifier:  ? PAC:16817203
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-1081 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30076.t000155 0.5kb upstream 0.5kb upstream 2712 true 30076: 1007826-1010537 Ricinus communis
30076.t000155 0.5kb upstream 0.5kb upstream 500 false 30076: 1007826-1008325 Ricinus communis
30076.t000155 0.5kb downstream 0.5kb downstream 2712 true 30076: 1008326-1011037 Ricinus communis
30076.t000155 0.5kb downstream 0.5kb downstream 500 false 30076: 1010538-1011037 Ricinus communis
30076.t000155 1.0kb upstream 1.0kb upstream 3212 true 30076: 1007326-1010537 Ricinus communis
30076.t000155 1.0kb upstream 1.0kb upstream 1000 false 30076: 1007326-1008325 Ricinus communis
30076.t000155 1.0kb downstream 1.0kb downstream 3212 true 30076: 1008326-1011537 Ricinus communis
30076.t000155 1.0kb downstream 1.0kb downstream 1000 false 30076: 1010538-1011537 Ricinus communis
30076.t000155 2.0kb upstream 2.0kb upstream 4212 true 30076: 1006326-1010537 Ricinus communis
30076.t000155 2.0kb upstream 2.0kb upstream 2000 false 30076: 1006326-1008325 Ricinus communis
30076.t000155 2.0kb downstream 2.0kb downstream 4212 true 30076: 1008326-1012537 Ricinus communis
30076.t000155 2.0kb downstream 2.0kb downstream 2000 false 30076: 1010538-1012537 Ricinus communis
30076.t000155 5.0kb upstream 5.0kb upstream 7212 true 30076: 1003326-1010537 Ricinus communis
30076.t000155 5.0kb upstream 5.0kb upstream 5000 false 30076: 1003326-1008325 Ricinus communis
30076.t000155 5.0kb downstream 5.0kb downstream 7212 true 30076: 1008326-1015537 Ricinus communis
30076.t000155 5.0kb downstream 5.0kb downstream 5000 false 30076: 1010538-1015537 Ricinus communis
30076.t000155 10.0kb upstream 10.0kb upstream 12212 true 30076: 998326-1010537 Ricinus communis
30076.t000155 10.0kb upstream 10.0kb upstream 10000 false 30076: 998326-1008325 Ricinus communis
30076.t000155 10.0kb downstream 10.0kb downstream 12212 true 30076: 1008326-1020537 Ricinus communis
30076.t000155 10.0kb downstream 10.0kb downstream 10000 false 30076: 1010538-1020537 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450307 5262 Malpighiales View MSA
124249445 5268 Malvidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain