Gene : 30113.t000001 R. communis v0.1
Defline:  (1 of 8) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  1
Name:  ? 30113.t000001 Secondary Identifier:  ? PAC:16817900
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PHOTOALL-PWY Ricinus communis pathologic  
Rcommunis PWY-101 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30113.t000001 0.5kb upstream 0.5kb upstream 1070 true 30113: 82268-83337 Ricinus communis
30113.t000001 0.5kb upstream 0.5kb upstream 500 false 30113: 82268-82767 Ricinus communis
30113.t000001 0.5kb downstream 0.5kb downstream 1070 true 30113: 82768-83837 Ricinus communis
30113.t000001 0.5kb downstream 0.5kb downstream 500 false 30113: 83338-83837 Ricinus communis
30113.t000001 1.0kb upstream 1.0kb upstream 1570 true 30113: 81768-83337 Ricinus communis
30113.t000001 1.0kb upstream 1.0kb upstream 1000 false 30113: 81768-82767 Ricinus communis
30113.t000001 1.0kb downstream 1.0kb downstream 1570 true 30113: 82768-84337 Ricinus communis
30113.t000001 1.0kb downstream 1.0kb downstream 1000 false 30113: 83338-84337 Ricinus communis
30113.t000001 2.0kb upstream 2.0kb upstream 2570 true 30113: 80768-83337 Ricinus communis
30113.t000001 2.0kb upstream 2.0kb upstream 2000 false 30113: 80768-82767 Ricinus communis
30113.t000001 2.0kb downstream 2.0kb downstream 2570 true 30113: 82768-85337 Ricinus communis
30113.t000001 2.0kb downstream 2.0kb downstream 2000 false 30113: 83338-85337 Ricinus communis
30113.t000001 5.0kb upstream 5.0kb upstream 5570 true 30113: 77768-83337 Ricinus communis
30113.t000001 5.0kb upstream 5.0kb upstream 5000 false 30113: 77768-82767 Ricinus communis
30113.t000001 5.0kb downstream 5.0kb downstream 5570 true 30113: 82768-88337 Ricinus communis
30113.t000001 5.0kb downstream 5.0kb downstream 5000 false 30113: 83338-88337 Ricinus communis
30113.t000001 10.0kb upstream 10.0kb upstream 10570 true 30113: 72768-83337 Ricinus communis
30113.t000001 10.0kb upstream 10.0kb upstream 10000 false 30113: 72768-82767 Ricinus communis
30113.t000001 10.0kb downstream 10.0kb downstream 10570 true 30113: 82768-93337 Ricinus communis
30113.t000001 10.0kb downstream 10.0kb downstream 10000 false 30113: 83338-93337 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122441587 5262 Malpighiales Singleton cluster - no MSA
124229687 5268 Malvidae Singleton cluster - no MSA
123945521 5270 Rosid Singleton cluster - no MSA
123753442 5271 Pentapetalae View MSA
122794783 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain