Gene : 30128.t000144 R. communis v0.1
Defline:  (1 of 1) PTHR21089//PTHR21089:SF10 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  86
Name:  ? 30128.t000144 Secondary Identifier:  ? PAC:16818273
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis ARO-PWY Ricinus communis pathologic  
Rcommunis PWY-6163 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30128.t000144 0.5kb upstream 0.5kb upstream 4170 true 30128: 484791-488960 Ricinus communis
30128.t000144 0.5kb upstream 0.5kb upstream 500 false 30128: 484791-485290 Ricinus communis
30128.t000144 0.5kb downstream 0.5kb downstream 4170 true 30128: 485291-489460 Ricinus communis
30128.t000144 0.5kb downstream 0.5kb downstream 500 false 30128: 488961-489460 Ricinus communis
30128.t000144 1.0kb upstream 1.0kb upstream 4670 true 30128: 484291-488960 Ricinus communis
30128.t000144 1.0kb upstream 1.0kb upstream 1000 false 30128: 484291-485290 Ricinus communis
30128.t000144 1.0kb downstream 1.0kb downstream 4670 true 30128: 485291-489960 Ricinus communis
30128.t000144 1.0kb downstream 1.0kb downstream 1000 false 30128: 488961-489960 Ricinus communis
30128.t000144 2.0kb upstream 2.0kb upstream 5670 true 30128: 483291-488960 Ricinus communis
30128.t000144 2.0kb upstream 2.0kb upstream 2000 false 30128: 483291-485290 Ricinus communis
30128.t000144 2.0kb downstream 2.0kb downstream 5670 true 30128: 485291-490960 Ricinus communis
30128.t000144 2.0kb downstream 2.0kb downstream 2000 false 30128: 488961-490960 Ricinus communis
30128.t000144 5.0kb upstream 5.0kb upstream 8670 true 30128: 480291-488960 Ricinus communis
30128.t000144 5.0kb upstream 5.0kb upstream 5000 false 30128: 480291-485290 Ricinus communis
30128.t000144 5.0kb downstream 5.0kb downstream 8670 true 30128: 485291-493960 Ricinus communis
30128.t000144 5.0kb downstream 5.0kb downstream 5000 false 30128: 488961-493960 Ricinus communis
30128.t000144 10.0kb upstream 10.0kb upstream 13670 true 30128: 475291-488960 Ricinus communis
30128.t000144 10.0kb upstream 10.0kb upstream 10000 false 30128: 475291-485290 Ricinus communis
30128.t000144 10.0kb downstream 10.0kb downstream 13670 true 30128: 485291-498960 Ricinus communis
30128.t000144 10.0kb downstream 10.0kb downstream 10000 false 30128: 488961-498960 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
122461731 5262 Malpighiales View MSA
124246373 5268 Malvidae View MSA
124070168 5270 Rosid View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain