Gene : 30128.t000134 R. communis v0.1
Defline:  (1 of 3) K04565 - superoxide dismutase, Cu-Zn family (SOD1) Genomic Order:  76
Name:  ? 30128.t000134 Secondary Identifier:  ? PAC:16818263
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis DETOX1-PWY Ricinus communis pathologic  
Rcommunis DETOX1-PWY-1 Ricinus communis pathologic  
Rcommunis PWY-6854 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30128.t000134 0.5kb upstream 0.5kb upstream 2100 true 30128: 461280-463379 Ricinus communis
30128.t000134 0.5kb upstream 0.5kb upstream 500 false 30128: 461280-461779 Ricinus communis
30128.t000134 0.5kb downstream 0.5kb downstream 2100 true 30128: 461780-463879 Ricinus communis
30128.t000134 0.5kb downstream 0.5kb downstream 500 false 30128: 463380-463879 Ricinus communis
30128.t000134 1.0kb upstream 1.0kb upstream 2600 true 30128: 460780-463379 Ricinus communis
30128.t000134 1.0kb upstream 1.0kb upstream 1000 false 30128: 460780-461779 Ricinus communis
30128.t000134 1.0kb downstream 1.0kb downstream 2600 true 30128: 461780-464379 Ricinus communis
30128.t000134 1.0kb downstream 1.0kb downstream 1000 false 30128: 463380-464379 Ricinus communis
30128.t000134 2.0kb upstream 2.0kb upstream 3600 true 30128: 459780-463379 Ricinus communis
30128.t000134 2.0kb upstream 2.0kb upstream 2000 false 30128: 459780-461779 Ricinus communis
30128.t000134 2.0kb downstream 2.0kb downstream 3600 true 30128: 461780-465379 Ricinus communis
30128.t000134 2.0kb downstream 2.0kb downstream 2000 false 30128: 463380-465379 Ricinus communis
30128.t000134 5.0kb upstream 5.0kb upstream 6600 true 30128: 456780-463379 Ricinus communis
30128.t000134 5.0kb upstream 5.0kb upstream 5000 false 30128: 456780-461779 Ricinus communis
30128.t000134 5.0kb downstream 5.0kb downstream 6600 true 30128: 461780-468379 Ricinus communis
30128.t000134 5.0kb downstream 5.0kb downstream 5000 false 30128: 463380-468379 Ricinus communis
30128.t000134 10.0kb upstream 10.0kb upstream 11600 true 30128: 451780-463379 Ricinus communis
30128.t000134 10.0kb upstream 10.0kb upstream 10000 false 30128: 451780-461779 Ricinus communis
30128.t000134 10.0kb downstream 10.0kb downstream 11600 true 30128: 461780-473379 Ricinus communis
30128.t000134 10.0kb downstream 10.0kb downstream 10000 false 30128: 463380-473379 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461896 5262 Malpighiales View MSA
124238216 5268 Malvidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain