Gene : 30131.t000029 R. communis v0.1
Defline:  (1 of 7) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  21
Name:  ? 30131.t000029 Secondary Identifier:  ? PAC:16818705
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-361 Ricinus communis pathologic  
Rcommunis PWY-6040 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30131.t000029 0.5kb upstream 0.5kb upstream 4446 true 30131: 142686-147131 Ricinus communis
30131.t000029 0.5kb upstream 0.5kb upstream 500 false 30131: 142686-143185 Ricinus communis
30131.t000029 0.5kb downstream 0.5kb downstream 4446 true 30131: 143186-147631 Ricinus communis
30131.t000029 0.5kb downstream 0.5kb downstream 500 false 30131: 147132-147631 Ricinus communis
30131.t000029 1.0kb upstream 1.0kb upstream 4946 true 30131: 142186-147131 Ricinus communis
30131.t000029 1.0kb upstream 1.0kb upstream 1000 false 30131: 142186-143185 Ricinus communis
30131.t000029 1.0kb downstream 1.0kb downstream 4946 true 30131: 143186-148131 Ricinus communis
30131.t000029 1.0kb downstream 1.0kb downstream 1000 false 30131: 147132-148131 Ricinus communis
30131.t000029 2.0kb upstream 2.0kb upstream 5946 true 30131: 141186-147131 Ricinus communis
30131.t000029 2.0kb upstream 2.0kb upstream 2000 false 30131: 141186-143185 Ricinus communis
30131.t000029 2.0kb downstream 2.0kb downstream 5946 true 30131: 143186-149131 Ricinus communis
30131.t000029 2.0kb downstream 2.0kb downstream 2000 false 30131: 147132-149131 Ricinus communis
30131.t000029 5.0kb upstream 5.0kb upstream 8946 true 30131: 138186-147131 Ricinus communis
30131.t000029 5.0kb upstream 5.0kb upstream 5000 false 30131: 138186-143185 Ricinus communis
30131.t000029 5.0kb downstream 5.0kb downstream 8946 true 30131: 143186-152131 Ricinus communis
30131.t000029 5.0kb downstream 5.0kb downstream 5000 false 30131: 147132-152131 Ricinus communis
30131.t000029 10.0kb upstream 10.0kb upstream 13946 true 30131: 133186-147131 Ricinus communis
30131.t000029 10.0kb upstream 10.0kb upstream 10000 false 30131: 133186-143185 Ricinus communis
30131.t000029 10.0kb downstream 10.0kb downstream 13946 true 30131: 143186-157131 Ricinus communis
30131.t000029 10.0kb downstream 10.0kb downstream 10000 false 30131: 147132-157131 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426707 5262 Malpighiales View MSA
124250027 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain