Gene : 30148.t000001 R. communis v0.1
Defline:  (1 of 1) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  1
Name:  ? 30148.t000001 Secondary Identifier:  ? PAC:16820548
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-7511 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30148.t000001 0.5kb upstream 0.5kb upstream 911 true 30148: 1988-2898 Ricinus communis
30148.t000001 0.5kb upstream 0.5kb upstream 500 false 30148: 1988-2487 Ricinus communis
30148.t000001 0.5kb downstream 0.5kb downstream 911 true 30148: 2488-3398 Ricinus communis
30148.t000001 0.5kb downstream 0.5kb downstream 500 false 30148: 2899-3398 Ricinus communis
30148.t000001 1.0kb upstream 1.0kb upstream 1411 true 30148: 1488-2898 Ricinus communis
30148.t000001 1.0kb upstream 1.0kb upstream 1000 false 30148: 1488-2487 Ricinus communis
30148.t000001 1.0kb downstream 1.0kb downstream 1411 true 30148: 2488-3898 Ricinus communis
30148.t000001 1.0kb downstream 1.0kb downstream 1000 false 30148: 2899-3898 Ricinus communis
30148.t000001 2.0kb upstream 2.0kb upstream 2411 true 30148: 488-2898 Ricinus communis
30148.t000001 2.0kb upstream 2.0kb upstream 2000 false 30148: 488-2487 Ricinus communis
30148.t000001 2.0kb downstream 2.0kb downstream 2411 true 30148: 2488-4898 Ricinus communis
30148.t000001 2.0kb downstream 2.0kb downstream 2000 false 30148: 2899-4898 Ricinus communis
30148.t000001 5.0kb upstream 5.0kb upstream 2898 true 30148: 1-2898 Ricinus communis
30148.t000001 5.0kb upstream 5.0kb upstream 2487 false 30148: 1-2487 Ricinus communis
30148.t000001 5.0kb downstream 5.0kb downstream 5411 true 30148: 2488-7898 Ricinus communis
30148.t000001 5.0kb downstream 5.0kb downstream 5000 false 30148: 2899-7898 Ricinus communis
30148.t000001 10.0kb upstream 10.0kb upstream 2898 true 30148: 1-2898 Ricinus communis
30148.t000001 10.0kb upstream 10.0kb upstream 2487 false 30148: 1-2487 Ricinus communis
30148.t000001 10.0kb downstream 10.0kb downstream 10411 true 30148: 2488-12898 Ricinus communis
30148.t000001 10.0kb downstream 10.0kb downstream 10000 false 30148: 2899-12898 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459690 5262 Malpighiales View MSA
124236485 5268 Malvidae View MSA
124073969 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain