Gene : 30170.t000260 R. communis v0.1
Defline:  (1 of 7) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  194
Name:  ? 30170.t000260 Secondary Identifier:  ? PAC:16821692
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-361 Ricinus communis pathologic  
Rcommunis PWY-6040 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30170.t000260 0.5kb upstream 0.5kb upstream 1859 true 30170: 1311718-1313576 Ricinus communis
30170.t000260 0.5kb upstream 0.5kb upstream 500 false 30170: 1311718-1312217 Ricinus communis
30170.t000260 0.5kb downstream 0.5kb downstream 1859 true 30170: 1312218-1314076 Ricinus communis
30170.t000260 0.5kb downstream 0.5kb downstream 500 false 30170: 1313577-1314076 Ricinus communis
30170.t000260 1.0kb upstream 1.0kb upstream 2359 true 30170: 1311218-1313576 Ricinus communis
30170.t000260 1.0kb upstream 1.0kb upstream 1000 false 30170: 1311218-1312217 Ricinus communis
30170.t000260 1.0kb downstream 1.0kb downstream 2359 true 30170: 1312218-1314576 Ricinus communis
30170.t000260 1.0kb downstream 1.0kb downstream 1000 false 30170: 1313577-1314576 Ricinus communis
30170.t000260 2.0kb upstream 2.0kb upstream 3359 true 30170: 1310218-1313576 Ricinus communis
30170.t000260 2.0kb upstream 2.0kb upstream 2000 false 30170: 1310218-1312217 Ricinus communis
30170.t000260 2.0kb downstream 2.0kb downstream 3359 true 30170: 1312218-1315576 Ricinus communis
30170.t000260 2.0kb downstream 2.0kb downstream 2000 false 30170: 1313577-1315576 Ricinus communis
30170.t000260 5.0kb upstream 5.0kb upstream 6359 true 30170: 1307218-1313576 Ricinus communis
30170.t000260 5.0kb upstream 5.0kb upstream 5000 false 30170: 1307218-1312217 Ricinus communis
30170.t000260 5.0kb downstream 5.0kb downstream 6359 true 30170: 1312218-1318576 Ricinus communis
30170.t000260 5.0kb downstream 5.0kb downstream 5000 false 30170: 1313577-1318576 Ricinus communis
30170.t000260 10.0kb upstream 10.0kb upstream 11359 true 30170: 1302218-1313576 Ricinus communis
30170.t000260 10.0kb upstream 10.0kb upstream 10000 false 30170: 1302218-1312217 Ricinus communis
30170.t000260 10.0kb downstream 10.0kb downstream 11359 true 30170: 1312218-1323576 Ricinus communis
30170.t000260 10.0kb downstream 10.0kb downstream 10000 false 30170: 1313577-1323576 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454006 5262 Malpighiales View MSA
124238828 5268 Malvidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain