Gene : 30170.t000726 R. communis v0.1
Defline:  (1 of 10) K13065 - shikimate O-hydroxycinnamoyltransferase (E2.3.1.133, HCT) Genomic Order:  635
Name:  ? 30170.t000726 Secondary Identifier:  ? PAC:16822147
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-4203 Ricinus communis pathologic  
Rcommunis PWY-5835 Ricinus communis pathologic  
Rcommunis PWY-6801 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30170.t000726 0.5kb upstream 0.5kb upstream 1823 true 30170: 3896051-3897873 Ricinus communis
30170.t000726 0.5kb upstream 0.5kb upstream 500 false 30170: 3897374-3897873 Ricinus communis
30170.t000726 0.5kb downstream 0.5kb downstream 1823 true 30170: 3895551-3897373 Ricinus communis
30170.t000726 0.5kb downstream 0.5kb downstream 500 false 30170: 3895551-3896050 Ricinus communis
30170.t000726 1.0kb upstream 1.0kb upstream 2323 true 30170: 3896051-3898373 Ricinus communis
30170.t000726 1.0kb upstream 1.0kb upstream 1000 false 30170: 3897374-3898373 Ricinus communis
30170.t000726 1.0kb downstream 1.0kb downstream 2323 true 30170: 3895051-3897373 Ricinus communis
30170.t000726 1.0kb downstream 1.0kb downstream 1000 false 30170: 3895051-3896050 Ricinus communis
30170.t000726 2.0kb upstream 2.0kb upstream 3323 true 30170: 3896051-3899373 Ricinus communis
30170.t000726 2.0kb upstream 2.0kb upstream 2000 false 30170: 3897374-3899373 Ricinus communis
30170.t000726 2.0kb downstream 2.0kb downstream 3323 true 30170: 3894051-3897373 Ricinus communis
30170.t000726 2.0kb downstream 2.0kb downstream 2000 false 30170: 3894051-3896050 Ricinus communis
30170.t000726 5.0kb upstream 5.0kb upstream 6323 true 30170: 3896051-3902373 Ricinus communis
30170.t000726 5.0kb upstream 5.0kb upstream 5000 false 30170: 3897374-3902373 Ricinus communis
30170.t000726 5.0kb downstream 5.0kb downstream 6323 true 30170: 3891051-3897373 Ricinus communis
30170.t000726 5.0kb downstream 5.0kb downstream 5000 false 30170: 3891051-3896050 Ricinus communis
30170.t000726 10.0kb upstream 10.0kb upstream 11323 true 30170: 3896051-3907373 Ricinus communis
30170.t000726 10.0kb upstream 10.0kb upstream 10000 false 30170: 3897374-3907373 Ricinus communis
30170.t000726 10.0kb downstream 10.0kb downstream 11323 true 30170: 3886051-3897373 Ricinus communis
30170.t000726 10.0kb downstream 10.0kb downstream 10000 false 30170: 3886051-3896050 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426115 5262 Malpighiales View MSA
124254246 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain