Gene : 30174.t000052 R. communis v0.1
Defline:  (1 of 1) PTHR12358//PTHR12358:SF43 - SPHINGOSINE KINASE // SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  335
Name:  ? 30174.t000052 Secondary Identifier:  ? PAC:16822301
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-7039 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30174.t000052 0.5kb upstream 0.5kb upstream 3938 true 30174: 1961238-1965175 Ricinus communis
30174.t000052 0.5kb upstream 0.5kb upstream 500 false 30174: 1964676-1965175 Ricinus communis
30174.t000052 0.5kb downstream 0.5kb downstream 3938 true 30174: 1960738-1964675 Ricinus communis
30174.t000052 0.5kb downstream 0.5kb downstream 500 false 30174: 1960738-1961237 Ricinus communis
30174.t000052 1.0kb upstream 1.0kb upstream 4438 true 30174: 1961238-1965675 Ricinus communis
30174.t000052 1.0kb upstream 1.0kb upstream 1000 false 30174: 1964676-1965675 Ricinus communis
30174.t000052 1.0kb downstream 1.0kb downstream 4438 true 30174: 1960238-1964675 Ricinus communis
30174.t000052 1.0kb downstream 1.0kb downstream 1000 false 30174: 1960238-1961237 Ricinus communis
30174.t000052 2.0kb upstream 2.0kb upstream 5438 true 30174: 1961238-1966675 Ricinus communis
30174.t000052 2.0kb upstream 2.0kb upstream 2000 false 30174: 1964676-1966675 Ricinus communis
30174.t000052 2.0kb downstream 2.0kb downstream 5438 true 30174: 1959238-1964675 Ricinus communis
30174.t000052 2.0kb downstream 2.0kb downstream 2000 false 30174: 1959238-1961237 Ricinus communis
30174.t000052 5.0kb upstream 5.0kb upstream 8438 true 30174: 1961238-1969675 Ricinus communis
30174.t000052 5.0kb upstream 5.0kb upstream 5000 false 30174: 1964676-1969675 Ricinus communis
30174.t000052 5.0kb downstream 5.0kb downstream 8438 true 30174: 1956238-1964675 Ricinus communis
30174.t000052 5.0kb downstream 5.0kb downstream 5000 false 30174: 1956238-1961237 Ricinus communis
30174.t000052 10.0kb upstream 10.0kb upstream 13438 true 30174: 1961238-1974675 Ricinus communis
30174.t000052 10.0kb upstream 10.0kb upstream 10000 false 30174: 1964676-1974675 Ricinus communis
30174.t000052 10.0kb downstream 10.0kb downstream 13438 true 30174: 1951238-1964675 Ricinus communis
30174.t000052 10.0kb downstream 10.0kb downstream 10000 false 30174: 1951238-1961237 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452515 5262 Malpighiales View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain