Gene : 30174.t000553 R. communis v0.1
Defline:  (1 of 3) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  551
Name:  ? 30174.t000553 Secondary Identifier:  ? PAC:16822796
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-3461 Ricinus communis pathologic  
Rcommunis PWY-3462 Ricinus communis pathologic  
Rcommunis PWY-3481 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30174.t000553 0.5kb upstream 0.5kb upstream 3838 true 30174: 3335308-3339145 Ricinus communis
30174.t000553 0.5kb upstream 0.5kb upstream 500 false 30174: 3335308-3335807 Ricinus communis
30174.t000553 0.5kb downstream 0.5kb downstream 3838 true 30174: 3335808-3339645 Ricinus communis
30174.t000553 0.5kb downstream 0.5kb downstream 500 false 30174: 3339146-3339645 Ricinus communis
30174.t000553 1.0kb upstream 1.0kb upstream 4338 true 30174: 3334808-3339145 Ricinus communis
30174.t000553 1.0kb upstream 1.0kb upstream 1000 false 30174: 3334808-3335807 Ricinus communis
30174.t000553 1.0kb downstream 1.0kb downstream 4338 true 30174: 3335808-3340145 Ricinus communis
30174.t000553 1.0kb downstream 1.0kb downstream 1000 false 30174: 3339146-3340145 Ricinus communis
30174.t000553 2.0kb upstream 2.0kb upstream 5338 true 30174: 3333808-3339145 Ricinus communis
30174.t000553 2.0kb upstream 2.0kb upstream 2000 false 30174: 3333808-3335807 Ricinus communis
30174.t000553 2.0kb downstream 2.0kb downstream 5338 true 30174: 3335808-3341145 Ricinus communis
30174.t000553 2.0kb downstream 2.0kb downstream 2000 false 30174: 3339146-3341145 Ricinus communis
30174.t000553 5.0kb upstream 5.0kb upstream 8338 true 30174: 3330808-3339145 Ricinus communis
30174.t000553 5.0kb upstream 5.0kb upstream 5000 false 30174: 3330808-3335807 Ricinus communis
30174.t000553 5.0kb downstream 5.0kb downstream 8338 true 30174: 3335808-3344145 Ricinus communis
30174.t000553 5.0kb downstream 5.0kb downstream 5000 false 30174: 3339146-3344145 Ricinus communis
30174.t000553 10.0kb upstream 10.0kb upstream 13338 true 30174: 3325808-3339145 Ricinus communis
30174.t000553 10.0kb upstream 10.0kb upstream 10000 false 30174: 3325808-3335807 Ricinus communis
30174.t000553 10.0kb downstream 10.0kb downstream 13338 true 30174: 3335808-3349145 Ricinus communis
30174.t000553 10.0kb downstream 10.0kb downstream 10000 false 30174: 3339146-3349145 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122464825 5262 Malpighiales View MSA
124252605 5268 Malvidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain