Gene : 30180.t000035 R. communis v0.1
Defline:  (1 of 6) K02706 - photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  33
Name:  ? 30180.t000035 Secondary Identifier:  ? PAC:16822922
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PHOTOALL-PWY Ricinus communis pathologic  
Rcommunis PWY-101 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30180.t000035 0.5kb upstream 0.5kb upstream 2443 true 30180: 724660-727102 Ricinus communis
30180.t000035 0.5kb upstream 0.5kb upstream 500 false 30180: 726603-727102 Ricinus communis
30180.t000035 0.5kb downstream 0.5kb downstream 2443 true 30180: 724160-726602 Ricinus communis
30180.t000035 0.5kb downstream 0.5kb downstream 500 false 30180: 724160-724659 Ricinus communis
30180.t000035 1.0kb upstream 1.0kb upstream 2943 true 30180: 724660-727602 Ricinus communis
30180.t000035 1.0kb upstream 1.0kb upstream 1000 false 30180: 726603-727602 Ricinus communis
30180.t000035 1.0kb downstream 1.0kb downstream 2943 true 30180: 723660-726602 Ricinus communis
30180.t000035 1.0kb downstream 1.0kb downstream 1000 false 30180: 723660-724659 Ricinus communis
30180.t000035 2.0kb upstream 2.0kb upstream 3943 true 30180: 724660-728602 Ricinus communis
30180.t000035 2.0kb upstream 2.0kb upstream 2000 false 30180: 726603-728602 Ricinus communis
30180.t000035 2.0kb downstream 2.0kb downstream 3943 true 30180: 722660-726602 Ricinus communis
30180.t000035 2.0kb downstream 2.0kb downstream 2000 false 30180: 722660-724659 Ricinus communis
30180.t000035 5.0kb upstream 5.0kb upstream 6943 true 30180: 724660-731602 Ricinus communis
30180.t000035 5.0kb upstream 5.0kb upstream 5000 false 30180: 726603-731602 Ricinus communis
30180.t000035 5.0kb downstream 5.0kb downstream 6943 true 30180: 719660-726602 Ricinus communis
30180.t000035 5.0kb downstream 5.0kb downstream 5000 false 30180: 719660-724659 Ricinus communis
30180.t000035 10.0kb upstream 10.0kb upstream 11943 true 30180: 724660-736602 Ricinus communis
30180.t000035 10.0kb upstream 10.0kb upstream 10000 false 30180: 726603-736602 Ricinus communis
30180.t000035 10.0kb downstream 10.0kb downstream 11943 true 30180: 714660-726602 Ricinus communis
30180.t000035 10.0kb downstream 10.0kb downstream 10000 false 30180: 714660-724659 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122442693 5262 Malpighiales Singleton cluster - no MSA
124230662 5268 Malvidae Singleton cluster - no MSA
123946400 5270 Rosid Singleton cluster - no MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain