Gene : 30189.t000043 R. communis v0.1
Defline:  (1 of 2) K01899 - succinyl-CoA synthetase alpha subunit (LSC1) Genomic Order:  40
Name:  ? 30189.t000043 Secondary Identifier:  ? PAC:16823128
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-5464 Ricinus communis pathologic  
Rcommunis PWY-5690 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30189.t000043 0.5kb upstream 0.5kb upstream 11028 true 30189: 962673-973700 Ricinus communis
30189.t000043 0.5kb upstream 0.5kb upstream 500 false 30189: 962673-963172 Ricinus communis
30189.t000043 0.5kb downstream 0.5kb downstream 11028 true 30189: 963173-974200 Ricinus communis
30189.t000043 0.5kb downstream 0.5kb downstream 500 false 30189: 973701-974200 Ricinus communis
30189.t000043 1.0kb upstream 1.0kb upstream 11528 true 30189: 962173-973700 Ricinus communis
30189.t000043 1.0kb upstream 1.0kb upstream 1000 false 30189: 962173-963172 Ricinus communis
30189.t000043 1.0kb downstream 1.0kb downstream 11528 true 30189: 963173-974700 Ricinus communis
30189.t000043 1.0kb downstream 1.0kb downstream 1000 false 30189: 973701-974700 Ricinus communis
30189.t000043 2.0kb upstream 2.0kb upstream 12528 true 30189: 961173-973700 Ricinus communis
30189.t000043 2.0kb upstream 2.0kb upstream 2000 false 30189: 961173-963172 Ricinus communis
30189.t000043 2.0kb downstream 2.0kb downstream 12528 true 30189: 963173-975700 Ricinus communis
30189.t000043 2.0kb downstream 2.0kb downstream 2000 false 30189: 973701-975700 Ricinus communis
30189.t000043 5.0kb upstream 5.0kb upstream 15528 true 30189: 958173-973700 Ricinus communis
30189.t000043 5.0kb upstream 5.0kb upstream 5000 false 30189: 958173-963172 Ricinus communis
30189.t000043 5.0kb downstream 5.0kb downstream 15528 true 30189: 963173-978700 Ricinus communis
30189.t000043 5.0kb downstream 5.0kb downstream 5000 false 30189: 973701-978700 Ricinus communis
30189.t000043 10.0kb upstream 10.0kb upstream 20528 true 30189: 953173-973700 Ricinus communis
30189.t000043 10.0kb upstream 10.0kb upstream 10000 false 30189: 953173-963172 Ricinus communis
30189.t000043 10.0kb downstream 10.0kb downstream 20528 true 30189: 963173-983700 Ricinus communis
30189.t000043 10.0kb downstream 10.0kb downstream 10000 false 30189: 973701-983700 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460895 5262 Malpighiales View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain