Gene : 30190.t000135 R. communis v0.1
Defline:  (1 of 1) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT Genomic Order:  69
Name:  ? 30190.t000135 Secondary Identifier:  ? PAC:16823263
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30190.t000135 0.5kb upstream 0.5kb upstream 9093 true 30190: 519959-529051 Ricinus communis
30190.t000135 0.5kb upstream 0.5kb upstream 500 false 30190: 519959-520458 Ricinus communis
30190.t000135 0.5kb downstream 0.5kb downstream 9093 true 30190: 520459-529551 Ricinus communis
30190.t000135 0.5kb downstream 0.5kb downstream 500 false 30190: 529052-529551 Ricinus communis
30190.t000135 1.0kb upstream 1.0kb upstream 9593 true 30190: 519459-529051 Ricinus communis
30190.t000135 1.0kb upstream 1.0kb upstream 1000 false 30190: 519459-520458 Ricinus communis
30190.t000135 1.0kb downstream 1.0kb downstream 9593 true 30190: 520459-530051 Ricinus communis
30190.t000135 1.0kb downstream 1.0kb downstream 1000 false 30190: 529052-530051 Ricinus communis
30190.t000135 2.0kb upstream 2.0kb upstream 10593 true 30190: 518459-529051 Ricinus communis
30190.t000135 2.0kb upstream 2.0kb upstream 2000 false 30190: 518459-520458 Ricinus communis
30190.t000135 2.0kb downstream 2.0kb downstream 10593 true 30190: 520459-531051 Ricinus communis
30190.t000135 2.0kb downstream 2.0kb downstream 2000 false 30190: 529052-531051 Ricinus communis
30190.t000135 5.0kb upstream 5.0kb upstream 13593 true 30190: 515459-529051 Ricinus communis
30190.t000135 5.0kb upstream 5.0kb upstream 5000 false 30190: 515459-520458 Ricinus communis
30190.t000135 5.0kb downstream 5.0kb downstream 13593 true 30190: 520459-534051 Ricinus communis
30190.t000135 5.0kb downstream 5.0kb downstream 5000 false 30190: 529052-534051 Ricinus communis
30190.t000135 10.0kb upstream 10.0kb upstream 18593 true 30190: 510459-529051 Ricinus communis
30190.t000135 10.0kb upstream 10.0kb upstream 10000 false 30190: 510459-520458 Ricinus communis
30190.t000135 10.0kb downstream 10.0kb downstream 18593 true 30190: 520459-539051 Ricinus communis
30190.t000135 10.0kb downstream 10.0kb downstream 10000 false 30190: 529052-539051 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040985 5273 Angiosperm View MSA
122384831 5262 Malpighiales View MSA
124242019 5268 Malvidae View MSA
124067851 5270 Rosid View MSA
123744864 5271 Pentapetalae View MSA
122791100 5272 Eudicot View MSA
121346168 5274 Embryophyte View MSA
123424573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain