Gene : 30190.t000536 R. communis v0.1
Defline:  (1 of 12) PF03108 - MuDR family transposase (DBD_Tnp_Mut) Genomic Order:  6
Name:  ? 30190.t000536 Secondary Identifier:  ? PAC:16823657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30190.t000536 0.5kb upstream 0.5kb upstream 2390 true 30190: 54180-56569 Ricinus communis
30190.t000536 0.5kb upstream 0.5kb upstream 500 false 30190: 54180-54679 Ricinus communis
30190.t000536 0.5kb downstream 0.5kb downstream 2390 true 30190: 54680-57069 Ricinus communis
30190.t000536 0.5kb downstream 0.5kb downstream 500 false 30190: 56570-57069 Ricinus communis
30190.t000536 1.0kb upstream 1.0kb upstream 2890 true 30190: 53680-56569 Ricinus communis
30190.t000536 1.0kb upstream 1.0kb upstream 1000 false 30190: 53680-54679 Ricinus communis
30190.t000536 1.0kb downstream 1.0kb downstream 2890 true 30190: 54680-57569 Ricinus communis
30190.t000536 1.0kb downstream 1.0kb downstream 1000 false 30190: 56570-57569 Ricinus communis
30190.t000536 2.0kb upstream 2.0kb upstream 3890 true 30190: 52680-56569 Ricinus communis
30190.t000536 2.0kb upstream 2.0kb upstream 2000 false 30190: 52680-54679 Ricinus communis
30190.t000536 2.0kb downstream 2.0kb downstream 3890 true 30190: 54680-58569 Ricinus communis
30190.t000536 2.0kb downstream 2.0kb downstream 2000 false 30190: 56570-58569 Ricinus communis
30190.t000536 5.0kb upstream 5.0kb upstream 6890 true 30190: 49680-56569 Ricinus communis
30190.t000536 5.0kb upstream 5.0kb upstream 5000 false 30190: 49680-54679 Ricinus communis
30190.t000536 5.0kb downstream 5.0kb downstream 6890 true 30190: 54680-61569 Ricinus communis
30190.t000536 5.0kb downstream 5.0kb downstream 5000 false 30190: 56570-61569 Ricinus communis
30190.t000536 10.0kb upstream 10.0kb upstream 11890 true 30190: 44680-56569 Ricinus communis
30190.t000536 10.0kb upstream 10.0kb upstream 10000 false 30190: 44680-54679 Ricinus communis
30190.t000536 10.0kb downstream 10.0kb downstream 11890 true 30190: 54680-66569 Ricinus communis
30190.t000536 10.0kb downstream 10.0kb downstream 10000 false 30190: 56570-66569 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782580 5273 Angiosperm View MSA
122442907 5262 Malpighiales Singleton cluster - no MSA
124230853 5268 Malvidae Singleton cluster - no MSA
123946578 5270 Rosid Singleton cluster - no MSA
123753270 5271 Pentapetalae View MSA
122775022 5272 Eudicot View MSA
121054091 5274 Embryophyte View MSA
123094089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain