Gene : 39576.t000001 R. communis v0.1
Defline:  (1 of 3) K02705//K02706 - photosystem II CP43 chlorophyll apoprotein (psbC) // photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  1
Name:  ? 39576.t000001 Secondary Identifier:  ? PAC:16827220
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PHOTOALL-PWY Ricinus communis pathologic  
Rcommunis PWY-101 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
39576.t000001 0.5kb upstream 0.5kb upstream 757 true 39576: 305-1061 Ricinus communis
39576.t000001 0.5kb upstream 0.5kb upstream 289 false 39576: 773-1061 Ricinus communis
39576.t000001 0.5kb downstream 0.5kb downstream 772 true 39576: 1-772 Ricinus communis
39576.t000001 0.5kb downstream 0.5kb downstream 304 false 39576: 1-304 Ricinus communis
39576.t000001 1.0kb upstream 1.0kb upstream 757 true 39576: 305-1061 Ricinus communis
39576.t000001 1.0kb upstream 1.0kb upstream 289 false 39576: 773-1061 Ricinus communis
39576.t000001 1.0kb downstream 1.0kb downstream 772 true 39576: 1-772 Ricinus communis
39576.t000001 1.0kb downstream 1.0kb downstream 304 false 39576: 1-304 Ricinus communis
39576.t000001 2.0kb upstream 2.0kb upstream 757 true 39576: 305-1061 Ricinus communis
39576.t000001 2.0kb upstream 2.0kb upstream 289 false 39576: 773-1061 Ricinus communis
39576.t000001 2.0kb downstream 2.0kb downstream 772 true 39576: 1-772 Ricinus communis
39576.t000001 2.0kb downstream 2.0kb downstream 304 false 39576: 1-304 Ricinus communis
39576.t000001 5.0kb upstream 5.0kb upstream 757 true 39576: 305-1061 Ricinus communis
39576.t000001 5.0kb upstream 5.0kb upstream 289 false 39576: 773-1061 Ricinus communis
39576.t000001 5.0kb downstream 5.0kb downstream 772 true 39576: 1-772 Ricinus communis
39576.t000001 5.0kb downstream 5.0kb downstream 304 false 39576: 1-304 Ricinus communis
39576.t000001 10.0kb upstream 10.0kb upstream 757 true 39576: 305-1061 Ricinus communis
39576.t000001 10.0kb upstream 10.0kb upstream 289 false 39576: 773-1061 Ricinus communis
39576.t000001 10.0kb downstream 10.0kb downstream 772 true 39576: 1-772 Ricinus communis
39576.t000001 10.0kb downstream 10.0kb downstream 304 false 39576: 1-304 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449234 5262 Malpighiales View MSA
124254128 5268 Malvidae View MSA
124039428 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain