Gene : 50507.t000001 R. communis v0.1
Defline:  (1 of 1) PF05947 - Type VI secretion system, ImpG, VasA, VC_A0110 (T6SS_VipB) Genomic Order:  1
Name:  ? 50507.t000001 Secondary Identifier:  ? PAC:16828273
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
50507.t000001 0.5kb upstream 0.5kb upstream 1329 true 50507: 1-1329 Ricinus communis
50507.t000001 0.5kb upstream 0.5kb upstream 146 false 50507: 1-146 Ricinus communis
50507.t000001 0.5kb downstream 0.5kb downstream 1212 true 50507: 147-1358 Ricinus communis
50507.t000001 0.5kb downstream 0.5kb downstream 29 false 50507: 1330-1358 Ricinus communis
50507.t000001 1.0kb upstream 1.0kb upstream 1329 true 50507: 1-1329 Ricinus communis
50507.t000001 1.0kb upstream 1.0kb upstream 146 false 50507: 1-146 Ricinus communis
50507.t000001 1.0kb downstream 1.0kb downstream 1212 true 50507: 147-1358 Ricinus communis
50507.t000001 1.0kb downstream 1.0kb downstream 29 false 50507: 1330-1358 Ricinus communis
50507.t000001 2.0kb upstream 2.0kb upstream 1329 true 50507: 1-1329 Ricinus communis
50507.t000001 2.0kb upstream 2.0kb upstream 146 false 50507: 1-146 Ricinus communis
50507.t000001 2.0kb downstream 2.0kb downstream 1212 true 50507: 147-1358 Ricinus communis
50507.t000001 2.0kb downstream 2.0kb downstream 29 false 50507: 1330-1358 Ricinus communis
50507.t000001 5.0kb upstream 5.0kb upstream 1329 true 50507: 1-1329 Ricinus communis
50507.t000001 5.0kb upstream 5.0kb upstream 146 false 50507: 1-146 Ricinus communis
50507.t000001 5.0kb downstream 5.0kb downstream 1212 true 50507: 147-1358 Ricinus communis
50507.t000001 5.0kb downstream 5.0kb downstream 29 false 50507: 1330-1358 Ricinus communis
50507.t000001 10.0kb upstream 10.0kb upstream 1329 true 50507: 1-1329 Ricinus communis
50507.t000001 10.0kb upstream 10.0kb upstream 146 false 50507: 1-146 Ricinus communis
50507.t000001 10.0kb downstream 10.0kb downstream 1212 true 50507: 147-1358 Ricinus communis
50507.t000001 10.0kb downstream 10.0kb downstream 29 false 50507: 1330-1358 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121577616 5273 Angiosperm Singleton cluster - no MSA
122446712 5262 Malpighiales Singleton cluster - no MSA
124234595 5268 Malvidae Singleton cluster - no MSA
123950234 5270 Rosid Singleton cluster - no MSA
123528369 5271 Pentapetalae Singleton cluster - no MSA
122563358 5272 Eudicot Singleton cluster - no MSA
120850104 5274 Embryophyte Singleton cluster - no MSA
122891301 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain