Gene : 54724.t000001 R. communis v0.1
Defline:  (1 of 1) 1.1.1.25//1.1.1.282 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase // Quinate/shikimate dehydrogenase Genomic Order:  1
Name:  ? 54724.t000001 Secondary Identifier:  ? PAC:16828737
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis ARO-PWY Ricinus communis pathologic  
Rcommunis PWY-6163 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
54724.t000001 0.5kb upstream 0.5kb upstream 981 true 54724: 147-1127 Ricinus communis
54724.t000001 0.5kb upstream 0.5kb upstream 133 false 54724: 995-1127 Ricinus communis
54724.t000001 0.5kb downstream 0.5kb downstream 994 true 54724: 1-994 Ricinus communis
54724.t000001 0.5kb downstream 0.5kb downstream 146 false 54724: 1-146 Ricinus communis
54724.t000001 1.0kb upstream 1.0kb upstream 981 true 54724: 147-1127 Ricinus communis
54724.t000001 1.0kb upstream 1.0kb upstream 133 false 54724: 995-1127 Ricinus communis
54724.t000001 1.0kb downstream 1.0kb downstream 994 true 54724: 1-994 Ricinus communis
54724.t000001 1.0kb downstream 1.0kb downstream 146 false 54724: 1-146 Ricinus communis
54724.t000001 2.0kb upstream 2.0kb upstream 981 true 54724: 147-1127 Ricinus communis
54724.t000001 2.0kb upstream 2.0kb upstream 133 false 54724: 995-1127 Ricinus communis
54724.t000001 2.0kb downstream 2.0kb downstream 994 true 54724: 1-994 Ricinus communis
54724.t000001 2.0kb downstream 2.0kb downstream 146 false 54724: 1-146 Ricinus communis
54724.t000001 5.0kb upstream 5.0kb upstream 981 true 54724: 147-1127 Ricinus communis
54724.t000001 5.0kb upstream 5.0kb upstream 133 false 54724: 995-1127 Ricinus communis
54724.t000001 5.0kb downstream 5.0kb downstream 994 true 54724: 1-994 Ricinus communis
54724.t000001 5.0kb downstream 5.0kb downstream 146 false 54724: 1-146 Ricinus communis
54724.t000001 10.0kb upstream 10.0kb upstream 981 true 54724: 147-1127 Ricinus communis
54724.t000001 10.0kb upstream 10.0kb upstream 133 false 54724: 995-1127 Ricinus communis
54724.t000001 10.0kb downstream 10.0kb downstream 994 true 54724: 1-994 Ricinus communis
54724.t000001 10.0kb downstream 10.0kb downstream 146 false 54724: 1-146 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121577995 5273 Angiosperm Singleton cluster - no MSA
122447114 5262 Malpighiales Singleton cluster - no MSA
124234988 5268 Malvidae Singleton cluster - no MSA
123950616 5270 Rosid Singleton cluster - no MSA
123528749 5271 Pentapetalae Singleton cluster - no MSA
122563738 5272 Eudicot Singleton cluster - no MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain