Gene : 55768.t000004 R. communis v0.1
Defline:  (1 of 2) K02256 - cytochrome c oxidase subunit 1 (COX1) Genomic Order:  4
Name:  ? 55768.t000004 Secondary Identifier:  ? PAC:16828863
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-3781 Ricinus communis pathologic  
Rcommunis PWY-7279 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
55768.t000004 0.5kb upstream 0.5kb upstream 1418 true 55768: 1678-3095 Ricinus communis
55768.t000004 0.5kb upstream 0.5kb upstream 500 false 55768: 1678-2177 Ricinus communis
55768.t000004 0.5kb downstream 0.5kb downstream 1418 true 55768: 2178-3595 Ricinus communis
55768.t000004 0.5kb downstream 0.5kb downstream 500 false 55768: 3096-3595 Ricinus communis
55768.t000004 1.0kb upstream 1.0kb upstream 1918 true 55768: 1178-3095 Ricinus communis
55768.t000004 1.0kb upstream 1.0kb upstream 1000 false 55768: 1178-2177 Ricinus communis
55768.t000004 1.0kb downstream 1.0kb downstream 1918 true 55768: 2178-4095 Ricinus communis
55768.t000004 1.0kb downstream 1.0kb downstream 1000 false 55768: 3096-4095 Ricinus communis
55768.t000004 2.0kb upstream 2.0kb upstream 2918 true 55768: 178-3095 Ricinus communis
55768.t000004 2.0kb upstream 2.0kb upstream 2000 false 55768: 178-2177 Ricinus communis
55768.t000004 2.0kb downstream 2.0kb downstream 2918 true 55768: 2178-5095 Ricinus communis
55768.t000004 2.0kb downstream 2.0kb downstream 2000 false 55768: 3096-5095 Ricinus communis
55768.t000004 5.0kb upstream 5.0kb upstream 3095 true 55768: 1-3095 Ricinus communis
55768.t000004 5.0kb upstream 5.0kb upstream 2177 false 55768: 1-2177 Ricinus communis
55768.t000004 5.0kb downstream 5.0kb downstream 5752 true 55768: 2178-7929 Ricinus communis
55768.t000004 5.0kb downstream 5.0kb downstream 4834 false 55768: 3096-7929 Ricinus communis
55768.t000004 10.0kb upstream 10.0kb upstream 3095 true 55768: 1-3095 Ricinus communis
55768.t000004 10.0kb upstream 10.0kb upstream 2177 false 55768: 1-2177 Ricinus communis
55768.t000004 10.0kb downstream 10.0kb downstream 5752 true 55768: 2178-7929 Ricinus communis
55768.t000004 10.0kb downstream 10.0kb downstream 4834 false 55768: 3096-7929 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782670 5273 Angiosperm View MSA
122447219 5262 Malpighiales Singleton cluster - no MSA
124235092 5268 Malvidae Singleton cluster - no MSA
123950715 5270 Rosid Singleton cluster - no MSA
123753565 5271 Pentapetalae View MSA
122775151 5272 Eudicot View MSA
121054177 5274 Embryophyte View MSA
123428635 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain