Gene : Cz01g01220 C. zofingiensis v5.2.3.2
Defline:  (1 of 1) PTHR11946:SF86 - METHIONINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  52
Name:  ? Cz01g01220 Secondary Identifier:  ? PAC:38236900
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Czofingiensis TRNA-CHARGING-PWY Chromochloris zofingiensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cz01g01220 0.5kb upstream 0.5kb upstream 7231 true chr01: 179650-186880 Chromochloris zofingiensis
Cz01g01220 0.5kb upstream 0.5kb upstream 500 false chr01: 186381-186880 Chromochloris zofingiensis
Cz01g01220 0.5kb downstream 0.5kb downstream 7231 true chr01: 179150-186380 Chromochloris zofingiensis
Cz01g01220 0.5kb downstream 0.5kb downstream 500 false chr01: 179150-179649 Chromochloris zofingiensis
Cz01g01220 1.0kb upstream 1.0kb upstream 7731 true chr01: 179650-187380 Chromochloris zofingiensis
Cz01g01220 1.0kb upstream 1.0kb upstream 1000 false chr01: 186381-187380 Chromochloris zofingiensis
Cz01g01220 1.0kb downstream 1.0kb downstream 7731 true chr01: 178650-186380 Chromochloris zofingiensis
Cz01g01220 1.0kb downstream 1.0kb downstream 1000 false chr01: 178650-179649 Chromochloris zofingiensis
Cz01g01220 2.0kb upstream 2.0kb upstream 8731 true chr01: 179650-188380 Chromochloris zofingiensis
Cz01g01220 2.0kb upstream 2.0kb upstream 2000 false chr01: 186381-188380 Chromochloris zofingiensis
Cz01g01220 2.0kb downstream 2.0kb downstream 8731 true chr01: 177650-186380 Chromochloris zofingiensis
Cz01g01220 2.0kb downstream 2.0kb downstream 2000 false chr01: 177650-179649 Chromochloris zofingiensis
Cz01g01220 5.0kb upstream 5.0kb upstream 11731 true chr01: 179650-191380 Chromochloris zofingiensis
Cz01g01220 5.0kb upstream 5.0kb upstream 5000 false chr01: 186381-191380 Chromochloris zofingiensis
Cz01g01220 5.0kb downstream 5.0kb downstream 11731 true chr01: 174650-186380 Chromochloris zofingiensis
Cz01g01220 5.0kb downstream 5.0kb downstream 5000 false chr01: 174650-179649 Chromochloris zofingiensis
Cz01g01220 10.0kb upstream 10.0kb upstream 16731 true chr01: 179650-196380 Chromochloris zofingiensis
Cz01g01220 10.0kb upstream 10.0kb upstream 10000 false chr01: 186381-196380 Chromochloris zofingiensis
Cz01g01220 10.0kb downstream 10.0kb downstream 16731 true chr01: 169650-186380 Chromochloris zofingiensis
Cz01g01220 10.0kb downstream 10.0kb downstream 10000 false chr01: 169650-179649 Chromochloris zofingiensis

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112072 5260 Chlorophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain