Gene : 29629.t000059 R. communis v0.1
Defline:  (1 of 7) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  57
Name:  ? 29629.t000059 Secondary Identifier:  ? PAC:16803988
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29629.t000059 0.5kb upstream 0.5kb upstream 1036 true 29629: 332066-333101 Ricinus communis
29629.t000059 0.5kb upstream 0.5kb upstream 500 false 29629: 332066-332565 Ricinus communis
29629.t000059 0.5kb downstream 0.5kb downstream 1036 true 29629: 332566-333601 Ricinus communis
29629.t000059 0.5kb downstream 0.5kb downstream 500 false 29629: 333102-333601 Ricinus communis
29629.t000059 1.0kb upstream 1.0kb upstream 1536 true 29629: 331566-333101 Ricinus communis
29629.t000059 1.0kb upstream 1.0kb upstream 1000 false 29629: 331566-332565 Ricinus communis
29629.t000059 1.0kb downstream 1.0kb downstream 1536 true 29629: 332566-334101 Ricinus communis
29629.t000059 1.0kb downstream 1.0kb downstream 1000 false 29629: 333102-334101 Ricinus communis
29629.t000059 2.0kb upstream 2.0kb upstream 2536 true 29629: 330566-333101 Ricinus communis
29629.t000059 2.0kb upstream 2.0kb upstream 2000 false 29629: 330566-332565 Ricinus communis
29629.t000059 2.0kb downstream 2.0kb downstream 2536 true 29629: 332566-335101 Ricinus communis
29629.t000059 2.0kb downstream 2.0kb downstream 2000 false 29629: 333102-335101 Ricinus communis
29629.t000059 5.0kb upstream 5.0kb upstream 5536 true 29629: 327566-333101 Ricinus communis
29629.t000059 5.0kb upstream 5.0kb upstream 5000 false 29629: 327566-332565 Ricinus communis
29629.t000059 5.0kb downstream 5.0kb downstream 5536 true 29629: 332566-338101 Ricinus communis
29629.t000059 5.0kb downstream 5.0kb downstream 5000 false 29629: 333102-338101 Ricinus communis
29629.t000059 10.0kb upstream 10.0kb upstream 10536 true 29629: 322566-333101 Ricinus communis
29629.t000059 10.0kb upstream 10.0kb upstream 10000 false 29629: 322566-332565 Ricinus communis
29629.t000059 10.0kb downstream 10.0kb downstream 10536 true 29629: 332566-343101 Ricinus communis
29629.t000059 10.0kb downstream 10.0kb downstream 10000 false 29629: 333102-343101 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122437811 5262 Malpighiales Singleton cluster - no MSA
124256409 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain