Gene : 29680.t000096 R. communis v0.1
Defline:  (1 of 3) K02705//K02706 - photosystem II CP43 chlorophyll apoprotein (psbC) // photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  92
Name:  ? 29680.t000096 Secondary Identifier:  ? PAC:16805583
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PHOTOALL-PWY Ricinus communis pathologic  
Rcommunis PWY-101 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29680.t000096 0.5kb upstream 0.5kb upstream 1031 true 29680: 644808-645838 Ricinus communis
29680.t000096 0.5kb upstream 0.5kb upstream 500 false 29680: 645339-645838 Ricinus communis
29680.t000096 0.5kb downstream 0.5kb downstream 1031 true 29680: 644308-645338 Ricinus communis
29680.t000096 0.5kb downstream 0.5kb downstream 500 false 29680: 644308-644807 Ricinus communis
29680.t000096 1.0kb upstream 1.0kb upstream 1531 true 29680: 644808-646338 Ricinus communis
29680.t000096 1.0kb upstream 1.0kb upstream 1000 false 29680: 645339-646338 Ricinus communis
29680.t000096 1.0kb downstream 1.0kb downstream 1531 true 29680: 643808-645338 Ricinus communis
29680.t000096 1.0kb downstream 1.0kb downstream 1000 false 29680: 643808-644807 Ricinus communis
29680.t000096 2.0kb upstream 2.0kb upstream 1967 true 29680: 644808-646774 Ricinus communis
29680.t000096 2.0kb upstream 2.0kb upstream 1436 false 29680: 645339-646774 Ricinus communis
29680.t000096 2.0kb downstream 2.0kb downstream 2531 true 29680: 642808-645338 Ricinus communis
29680.t000096 2.0kb downstream 2.0kb downstream 2000 false 29680: 642808-644807 Ricinus communis
29680.t000096 5.0kb upstream 5.0kb upstream 1967 true 29680: 644808-646774 Ricinus communis
29680.t000096 5.0kb upstream 5.0kb upstream 1436 false 29680: 645339-646774 Ricinus communis
29680.t000096 5.0kb downstream 5.0kb downstream 5531 true 29680: 639808-645338 Ricinus communis
29680.t000096 5.0kb downstream 5.0kb downstream 5000 false 29680: 639808-644807 Ricinus communis
29680.t000096 10.0kb upstream 10.0kb upstream 1967 true 29680: 644808-646774 Ricinus communis
29680.t000096 10.0kb upstream 10.0kb upstream 1436 false 29680: 645339-646774 Ricinus communis
29680.t000096 10.0kb downstream 10.0kb downstream 10531 true 29680: 634808-645338 Ricinus communis
29680.t000096 10.0kb downstream 10.0kb downstream 10000 false 29680: 634808-644807 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122390886 5262 Malpighiales View MSA
124254444 5268 Malvidae View MSA
124074858 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain