Gene : 27990.t000001 R. communis v0.1
Defline:  (1 of 4) PTHR30258//PTHR30258:SF1 - TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATED // PROTEIN TRANSPORT PROTEIN HOFB HOMOLOG Genomic Order:  1
Name:  ? 27990.t000001 Secondary Identifier:  ? PAC:16799740
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
27990.t000001 0.5kb upstream 0.5kb upstream 1643 true 27990: 72-1714 Ricinus communis
27990.t000001 0.5kb upstream 0.5kb upstream 500 false 27990: 1215-1714 Ricinus communis
27990.t000001 0.5kb downstream 0.5kb downstream 1214 true 27990: 1-1214 Ricinus communis
27990.t000001 0.5kb downstream 0.5kb downstream 71 false 27990: 1-71 Ricinus communis
27990.t000001 1.0kb upstream 1.0kb upstream 2143 true 27990: 72-2214 Ricinus communis
27990.t000001 1.0kb upstream 1.0kb upstream 1000 false 27990: 1215-2214 Ricinus communis
27990.t000001 1.0kb downstream 1.0kb downstream 1214 true 27990: 1-1214 Ricinus communis
27990.t000001 1.0kb downstream 1.0kb downstream 71 false 27990: 1-71 Ricinus communis
27990.t000001 2.0kb upstream 2.0kb upstream 3143 true 27990: 72-3214 Ricinus communis
27990.t000001 2.0kb upstream 2.0kb upstream 2000 false 27990: 1215-3214 Ricinus communis
27990.t000001 2.0kb downstream 2.0kb downstream 1214 true 27990: 1-1214 Ricinus communis
27990.t000001 2.0kb downstream 2.0kb downstream 71 false 27990: 1-71 Ricinus communis
27990.t000001 5.0kb upstream 5.0kb upstream 6143 true 27990: 72-6214 Ricinus communis
27990.t000001 5.0kb upstream 5.0kb upstream 5000 false 27990: 1215-6214 Ricinus communis
27990.t000001 5.0kb downstream 5.0kb downstream 1214 true 27990: 1-1214 Ricinus communis
27990.t000001 5.0kb downstream 5.0kb downstream 71 false 27990: 1-71 Ricinus communis
27990.t000001 10.0kb upstream 10.0kb upstream 9273 true 27990: 72-9344 Ricinus communis
27990.t000001 10.0kb upstream 10.0kb upstream 8130 false 27990: 1215-9344 Ricinus communis
27990.t000001 10.0kb downstream 10.0kb downstream 1214 true 27990: 1-1214 Ricinus communis
27990.t000001 10.0kb downstream 10.0kb downstream 71 false 27990: 1-71 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121568883 5273 Angiosperm Singleton cluster - no MSA
122436346 5262 Malpighiales Singleton cluster - no MSA
124224970 5268 Malvidae Singleton cluster - no MSA
123941194 5270 Rosid Singleton cluster - no MSA
123519615 5271 Pentapetalae Singleton cluster - no MSA
122554620 5272 Eudicot Singleton cluster - no MSA
120841384 5274 Embryophyte Singleton cluster - no MSA
122882620 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain