Gene : 28723.t000001 R. communis v0.1
Defline:  (1 of 1) PF05658//PF05662 - Head domain of trimeric autotransporter adhesin (YadA_head) // Coiled stalk of trimeric autotransporter adhesin (YadA_stalk) Genomic Order:  1
Name:  ? 28723.t000001 Secondary Identifier:  ? PAC:16801594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28723.t000001 0.5kb upstream 0.5kb upstream 2305 true 28723: 1-2305 Ricinus communis
28723.t000001 0.5kb upstream 0.5kb upstream 65 false 28723: 1-65 Ricinus communis
28723.t000001 0.5kb downstream 0.5kb downstream 2250 true 28723: 66-2315 Ricinus communis
28723.t000001 0.5kb downstream 0.5kb downstream 10 false 28723: 2306-2315 Ricinus communis
28723.t000001 1.0kb upstream 1.0kb upstream 2305 true 28723: 1-2305 Ricinus communis
28723.t000001 1.0kb upstream 1.0kb upstream 65 false 28723: 1-65 Ricinus communis
28723.t000001 1.0kb downstream 1.0kb downstream 2250 true 28723: 66-2315 Ricinus communis
28723.t000001 1.0kb downstream 1.0kb downstream 10 false 28723: 2306-2315 Ricinus communis
28723.t000001 2.0kb upstream 2.0kb upstream 2305 true 28723: 1-2305 Ricinus communis
28723.t000001 2.0kb upstream 2.0kb upstream 65 false 28723: 1-65 Ricinus communis
28723.t000001 2.0kb downstream 2.0kb downstream 2250 true 28723: 66-2315 Ricinus communis
28723.t000001 2.0kb downstream 2.0kb downstream 10 false 28723: 2306-2315 Ricinus communis
28723.t000001 5.0kb upstream 5.0kb upstream 2305 true 28723: 1-2305 Ricinus communis
28723.t000001 5.0kb upstream 5.0kb upstream 65 false 28723: 1-65 Ricinus communis
28723.t000001 5.0kb downstream 5.0kb downstream 2250 true 28723: 66-2315 Ricinus communis
28723.t000001 5.0kb downstream 5.0kb downstream 10 false 28723: 2306-2315 Ricinus communis
28723.t000001 10.0kb upstream 10.0kb upstream 2305 true 28723: 1-2305 Ricinus communis
28723.t000001 10.0kb upstream 10.0kb upstream 65 false 28723: 1-65 Ricinus communis
28723.t000001 10.0kb downstream 10.0kb downstream 2250 true 28723: 66-2315 Ricinus communis
28723.t000001 10.0kb downstream 10.0kb downstream 10 false 28723: 2306-2315 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121569390 5273 Angiosperm Singleton cluster - no MSA
122436951 5262 Malpighiales Singleton cluster - no MSA
124225536 5268 Malvidae Singleton cluster - no MSA
123941725 5270 Rosid Singleton cluster - no MSA
123520123 5271 Pentapetalae Singleton cluster - no MSA
122555128 5272 Eudicot Singleton cluster - no MSA
120841889 5274 Embryophyte Singleton cluster - no MSA
122883124 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain