Gene : 28812.t000001 R. communis v0.1
Defline:  (1 of 5) PF00665 - Integrase core domain (rve) Genomic Order:  1
Name:  ? 28812.t000001 Secondary Identifier:  ? PAC:16801725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28812.t000001 0.5kb upstream 0.5kb upstream 1497 true 28812: 1-1497 Ricinus communis
28812.t000001 0.5kb upstream 0.5kb upstream 132 false 28812: 1-132 Ricinus communis
28812.t000001 0.5kb downstream 0.5kb downstream 1865 true 28812: 133-1997 Ricinus communis
28812.t000001 0.5kb downstream 0.5kb downstream 500 false 28812: 1498-1997 Ricinus communis
28812.t000001 1.0kb upstream 1.0kb upstream 1497 true 28812: 1-1497 Ricinus communis
28812.t000001 1.0kb upstream 1.0kb upstream 132 false 28812: 1-132 Ricinus communis
28812.t000001 1.0kb downstream 1.0kb downstream 2365 true 28812: 133-2497 Ricinus communis
28812.t000001 1.0kb downstream 1.0kb downstream 1000 false 28812: 1498-2497 Ricinus communis
28812.t000001 2.0kb upstream 2.0kb upstream 1497 true 28812: 1-1497 Ricinus communis
28812.t000001 2.0kb upstream 2.0kb upstream 132 false 28812: 1-132 Ricinus communis
28812.t000001 2.0kb downstream 2.0kb downstream 3133 true 28812: 133-3265 Ricinus communis
28812.t000001 2.0kb downstream 2.0kb downstream 1768 false 28812: 1498-3265 Ricinus communis
28812.t000001 5.0kb upstream 5.0kb upstream 1497 true 28812: 1-1497 Ricinus communis
28812.t000001 5.0kb upstream 5.0kb upstream 132 false 28812: 1-132 Ricinus communis
28812.t000001 5.0kb downstream 5.0kb downstream 3133 true 28812: 133-3265 Ricinus communis
28812.t000001 5.0kb downstream 5.0kb downstream 1768 false 28812: 1498-3265 Ricinus communis
28812.t000001 10.0kb upstream 10.0kb upstream 1497 true 28812: 1-1497 Ricinus communis
28812.t000001 10.0kb upstream 10.0kb upstream 132 false 28812: 1-132 Ricinus communis
28812.t000001 10.0kb downstream 10.0kb downstream 3133 true 28812: 133-3265 Ricinus communis
28812.t000001 10.0kb downstream 10.0kb downstream 1768 false 28812: 1498-3265 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121569440 5273 Angiosperm Singleton cluster - no MSA
122437007 5262 Malpighiales Singleton cluster - no MSA
124225589 5268 Malvidae Singleton cluster - no MSA
123941777 5270 Rosid Singleton cluster - no MSA
123520173 5271 Pentapetalae Singleton cluster - no MSA
122555178 5272 Eudicot Singleton cluster - no MSA
120841939 5274 Embryophyte Singleton cluster - no MSA
122883173 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain