Gene : 28708.t000005 R. communis v0.1
Defline:  (1 of 1) PTHR22594//PTHR22594:SF36 - ASPARTYL/LYSYL-TRNA SYNTHETASE // ASPARAGINE--TRNA LIGASE, CYTOPLASMIC 2 Genomic Order:  5
Name:  ? 28708.t000005 Secondary Identifier:  ? PAC:16801568
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28708.t000005 0.5kb upstream 0.5kb upstream 3676 true 28708: 21930-25605 Ricinus communis
28708.t000005 0.5kb upstream 0.5kb upstream 500 false 28708: 21930-22429 Ricinus communis
28708.t000005 0.5kb downstream 0.5kb downstream 3676 true 28708: 22430-26105 Ricinus communis
28708.t000005 0.5kb downstream 0.5kb downstream 500 false 28708: 25606-26105 Ricinus communis
28708.t000005 1.0kb upstream 1.0kb upstream 4176 true 28708: 21430-25605 Ricinus communis
28708.t000005 1.0kb upstream 1.0kb upstream 1000 false 28708: 21430-22429 Ricinus communis
28708.t000005 1.0kb downstream 1.0kb downstream 4176 true 28708: 22430-26605 Ricinus communis
28708.t000005 1.0kb downstream 1.0kb downstream 1000 false 28708: 25606-26605 Ricinus communis
28708.t000005 2.0kb upstream 2.0kb upstream 5176 true 28708: 20430-25605 Ricinus communis
28708.t000005 2.0kb upstream 2.0kb upstream 2000 false 28708: 20430-22429 Ricinus communis
28708.t000005 2.0kb downstream 2.0kb downstream 5176 true 28708: 22430-27605 Ricinus communis
28708.t000005 2.0kb downstream 2.0kb downstream 2000 false 28708: 25606-27605 Ricinus communis
28708.t000005 5.0kb upstream 5.0kb upstream 8176 true 28708: 17430-25605 Ricinus communis
28708.t000005 5.0kb upstream 5.0kb upstream 5000 false 28708: 17430-22429 Ricinus communis
28708.t000005 5.0kb downstream 5.0kb downstream 8176 true 28708: 22430-30605 Ricinus communis
28708.t000005 5.0kb downstream 5.0kb downstream 5000 false 28708: 25606-30605 Ricinus communis
28708.t000005 10.0kb upstream 10.0kb upstream 13176 true 28708: 12430-25605 Ricinus communis
28708.t000005 10.0kb upstream 10.0kb upstream 10000 false 28708: 12430-22429 Ricinus communis
28708.t000005 10.0kb downstream 10.0kb downstream 13176 true 28708: 22430-35605 Ricinus communis
28708.t000005 10.0kb downstream 10.0kb downstream 10000 false 28708: 25606-35605 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453419 5262 Malpighiales View MSA
124250826 5268 Malvidae View MSA
124074798 5270 Rosid View MSA
123738885 5271 Pentapetalae View MSA
122790023 5272 Eudicot View MSA
122045893 5273 Angiosperm View MSA
121347200 5274 Embryophyte View MSA
123425101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain