Gene : 27625.t000003 R. communis v0.1
Defline:  (1 of 1) 4.2.1.3//4.2.1.99 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase // 2-methylisocitrate dehydratase / (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate hydro-lyase Genomic Order:  3
Name:  ? 27625.t000003 Secondary Identifier:  ? PAC:16798841
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis GLYOXYLATE-BYPASS Ricinus communis pathologic  
Rcommunis PWY-5464 Ricinus communis pathologic  
Rcommunis PWY-561 Ricinus communis pathologic  
Rcommunis PWY-5690 Ricinus communis pathologic  
Rcommunis PWY-6549 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
27625.t000003 0.5kb upstream 0.5kb upstream 3408 true 27625: 3978-7385 Ricinus communis
27625.t000003 0.5kb upstream 0.5kb upstream 31 false 27625: 7355-7385 Ricinus communis
27625.t000003 0.5kb downstream 0.5kb downstream 3877 true 27625: 3478-7354 Ricinus communis
27625.t000003 0.5kb downstream 0.5kb downstream 500 false 27625: 3478-3977 Ricinus communis
27625.t000003 1.0kb upstream 1.0kb upstream 3408 true 27625: 3978-7385 Ricinus communis
27625.t000003 1.0kb upstream 1.0kb upstream 31 false 27625: 7355-7385 Ricinus communis
27625.t000003 1.0kb downstream 1.0kb downstream 4377 true 27625: 2978-7354 Ricinus communis
27625.t000003 1.0kb downstream 1.0kb downstream 1000 false 27625: 2978-3977 Ricinus communis
27625.t000003 2.0kb upstream 2.0kb upstream 3408 true 27625: 3978-7385 Ricinus communis
27625.t000003 2.0kb upstream 2.0kb upstream 31 false 27625: 7355-7385 Ricinus communis
27625.t000003 2.0kb downstream 2.0kb downstream 5377 true 27625: 1978-7354 Ricinus communis
27625.t000003 2.0kb downstream 2.0kb downstream 2000 false 27625: 1978-3977 Ricinus communis
27625.t000003 5.0kb upstream 5.0kb upstream 3408 true 27625: 3978-7385 Ricinus communis
27625.t000003 5.0kb upstream 5.0kb upstream 31 false 27625: 7355-7385 Ricinus communis
27625.t000003 5.0kb downstream 5.0kb downstream 7354 true 27625: 1-7354 Ricinus communis
27625.t000003 5.0kb downstream 5.0kb downstream 3977 false 27625: 1-3977 Ricinus communis
27625.t000003 10.0kb upstream 10.0kb upstream 3408 true 27625: 3978-7385 Ricinus communis
27625.t000003 10.0kb upstream 10.0kb upstream 31 false 27625: 7355-7385 Ricinus communis
27625.t000003 10.0kb downstream 10.0kb downstream 7354 true 27625: 1-7354 Ricinus communis
27625.t000003 10.0kb downstream 10.0kb downstream 3977 false 27625: 1-3977 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121568533 5273 Angiosperm Singleton cluster - no MSA
122435946 5262 Malpighiales Singleton cluster - no MSA
124224587 5268 Malvidae Singleton cluster - no MSA
123940833 5270 Rosid Singleton cluster - no MSA
123519264 5271 Pentapetalae Singleton cluster - no MSA
122554269 5272 Eudicot Singleton cluster - no MSA
120841035 5274 Embryophyte Singleton cluster - no MSA
123421993 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain