Gene : 27875.t000003 R. communis v0.1
Defline:  (1 of 2) PF08722 - TnsA endonuclease N terminal (Tn7_Tnp_TnsA_N) Genomic Order:  3
Name:  ? 27875.t000003 Secondary Identifier:  ? PAC:16799370
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
27875.t000003 0.5kb upstream 0.5kb upstream 1574 true 27875: 8428-10001 Ricinus communis
27875.t000003 0.5kb upstream 0.5kb upstream 500 false 27875: 8428-8927 Ricinus communis
27875.t000003 0.5kb downstream 0.5kb downstream 1087 true 27875: 8928-10014 Ricinus communis
27875.t000003 0.5kb downstream 0.5kb downstream 13 false 27875: 10002-10014 Ricinus communis
27875.t000003 1.0kb upstream 1.0kb upstream 2074 true 27875: 7928-10001 Ricinus communis
27875.t000003 1.0kb upstream 1.0kb upstream 1000 false 27875: 7928-8927 Ricinus communis
27875.t000003 1.0kb downstream 1.0kb downstream 1087 true 27875: 8928-10014 Ricinus communis
27875.t000003 1.0kb downstream 1.0kb downstream 13 false 27875: 10002-10014 Ricinus communis
27875.t000003 2.0kb upstream 2.0kb upstream 3074 true 27875: 6928-10001 Ricinus communis
27875.t000003 2.0kb upstream 2.0kb upstream 2000 false 27875: 6928-8927 Ricinus communis
27875.t000003 2.0kb downstream 2.0kb downstream 1087 true 27875: 8928-10014 Ricinus communis
27875.t000003 2.0kb downstream 2.0kb downstream 13 false 27875: 10002-10014 Ricinus communis
27875.t000003 5.0kb upstream 5.0kb upstream 6074 true 27875: 3928-10001 Ricinus communis
27875.t000003 5.0kb upstream 5.0kb upstream 5000 false 27875: 3928-8927 Ricinus communis
27875.t000003 5.0kb downstream 5.0kb downstream 1087 true 27875: 8928-10014 Ricinus communis
27875.t000003 5.0kb downstream 5.0kb downstream 13 false 27875: 10002-10014 Ricinus communis
27875.t000003 10.0kb upstream 10.0kb upstream 10001 true 27875: 1-10001 Ricinus communis
27875.t000003 10.0kb upstream 10.0kb upstream 8927 false 27875: 1-8927 Ricinus communis
27875.t000003 10.0kb downstream 10.0kb downstream 1087 true 27875: 8928-10014 Ricinus communis
27875.t000003 10.0kb downstream 10.0kb downstream 13 false 27875: 10002-10014 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121568763 5273 Angiosperm Singleton cluster - no MSA
122436201 5262 Malpighiales Singleton cluster - no MSA
124224833 5268 Malvidae Singleton cluster - no MSA
123941070 5270 Rosid Singleton cluster - no MSA
123519495 5271 Pentapetalae Singleton cluster - no MSA
122554500 5272 Eudicot Singleton cluster - no MSA
120841264 5274 Embryophyte Singleton cluster - no MSA
122882502 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain