Gene : 29602.t000006 R. communis v0.1
Defline:  (1 of 1) PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Genomic Order:  4
Name:  ? 29602.t000006 Secondary Identifier:  ? PAC:16803534
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-7511 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29602.t000006 0.5kb upstream 0.5kb upstream 12132 true 29602: 58041-70172 Ricinus communis
29602.t000006 0.5kb upstream 0.5kb upstream 500 false 29602: 69673-70172 Ricinus communis
29602.t000006 0.5kb downstream 0.5kb downstream 12132 true 29602: 57541-69672 Ricinus communis
29602.t000006 0.5kb downstream 0.5kb downstream 500 false 29602: 57541-58040 Ricinus communis
29602.t000006 1.0kb upstream 1.0kb upstream 12632 true 29602: 58041-70672 Ricinus communis
29602.t000006 1.0kb upstream 1.0kb upstream 1000 false 29602: 69673-70672 Ricinus communis
29602.t000006 1.0kb downstream 1.0kb downstream 12632 true 29602: 57041-69672 Ricinus communis
29602.t000006 1.0kb downstream 1.0kb downstream 1000 false 29602: 57041-58040 Ricinus communis
29602.t000006 2.0kb upstream 2.0kb upstream 13632 true 29602: 58041-71672 Ricinus communis
29602.t000006 2.0kb upstream 2.0kb upstream 2000 false 29602: 69673-71672 Ricinus communis
29602.t000006 2.0kb downstream 2.0kb downstream 13632 true 29602: 56041-69672 Ricinus communis
29602.t000006 2.0kb downstream 2.0kb downstream 2000 false 29602: 56041-58040 Ricinus communis
29602.t000006 5.0kb upstream 5.0kb upstream 16632 true 29602: 58041-74672 Ricinus communis
29602.t000006 5.0kb upstream 5.0kb upstream 5000 false 29602: 69673-74672 Ricinus communis
29602.t000006 5.0kb downstream 5.0kb downstream 16632 true 29602: 53041-69672 Ricinus communis
29602.t000006 5.0kb downstream 5.0kb downstream 5000 false 29602: 53041-58040 Ricinus communis
29602.t000006 10.0kb upstream 10.0kb upstream 21632 true 29602: 58041-79672 Ricinus communis
29602.t000006 10.0kb upstream 10.0kb upstream 10000 false 29602: 69673-79672 Ricinus communis
29602.t000006 10.0kb downstream 10.0kb downstream 21632 true 29602: 48041-69672 Ricinus communis
29602.t000006 10.0kb downstream 10.0kb downstream 10000 false 29602: 48041-58040 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457943 5262 Malpighiales View MSA
124237502 5268 Malvidae View MSA
124064467 5270 Rosid View MSA
123740088 5271 Pentapetalae View MSA
122794553 5272 Eudicot View MSA
122042659 5273 Angiosperm View MSA
121345958 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain