Gene : 28349.t000002 R. communis v0.1
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? 28349.t000002 Secondary Identifier:  ? PAC:16800726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28349.t000002 0.5kb upstream 0.5kb upstream 5721 true 28349: 31447-37167 Ricinus communis
28349.t000002 0.5kb upstream 0.5kb upstream 500 false 28349: 36668-37167 Ricinus communis
28349.t000002 0.5kb downstream 0.5kb downstream 5721 true 28349: 30947-36667 Ricinus communis
28349.t000002 0.5kb downstream 0.5kb downstream 500 false 28349: 30947-31446 Ricinus communis
28349.t000002 1.0kb upstream 1.0kb upstream 6221 true 28349: 31447-37667 Ricinus communis
28349.t000002 1.0kb upstream 1.0kb upstream 1000 false 28349: 36668-37667 Ricinus communis
28349.t000002 1.0kb downstream 1.0kb downstream 6221 true 28349: 30447-36667 Ricinus communis
28349.t000002 1.0kb downstream 1.0kb downstream 1000 false 28349: 30447-31446 Ricinus communis
28349.t000002 2.0kb upstream 2.0kb upstream 7221 true 28349: 31447-38667 Ricinus communis
28349.t000002 2.0kb upstream 2.0kb upstream 2000 false 28349: 36668-38667 Ricinus communis
28349.t000002 2.0kb downstream 2.0kb downstream 7221 true 28349: 29447-36667 Ricinus communis
28349.t000002 2.0kb downstream 2.0kb downstream 2000 false 28349: 29447-31446 Ricinus communis
28349.t000002 5.0kb upstream 5.0kb upstream 10221 true 28349: 31447-41667 Ricinus communis
28349.t000002 5.0kb upstream 5.0kb upstream 5000 false 28349: 36668-41667 Ricinus communis
28349.t000002 5.0kb downstream 5.0kb downstream 10221 true 28349: 26447-36667 Ricinus communis
28349.t000002 5.0kb downstream 5.0kb downstream 5000 false 28349: 26447-31446 Ricinus communis
28349.t000002 10.0kb upstream 10.0kb upstream 10269 true 28349: 31447-41715 Ricinus communis
28349.t000002 10.0kb upstream 10.0kb upstream 5048 false 28349: 36668-41715 Ricinus communis
28349.t000002 10.0kb downstream 10.0kb downstream 15221 true 28349: 21447-36667 Ricinus communis
28349.t000002 10.0kb downstream 10.0kb downstream 10000 false 28349: 21447-31446 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454972 5262 Malpighiales View MSA
124242500 5268 Malvidae View MSA
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain