Gene : 28611.t000005 R. communis v0.1
Defline:  (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  5
Name:  ? 28611.t000005 Secondary Identifier:  ? PAC:16801242
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis CAROTENOID-PWY Ricinus communis pathologic  
Rcommunis PWY-6475 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28611.t000005 0.5kb upstream 0.5kb upstream 4607 true 28611: 72961-77567 Ricinus communis
28611.t000005 0.5kb upstream 0.5kb upstream 500 false 28611: 77068-77567 Ricinus communis
28611.t000005 0.5kb downstream 0.5kb downstream 4607 true 28611: 72461-77067 Ricinus communis
28611.t000005 0.5kb downstream 0.5kb downstream 500 false 28611: 72461-72960 Ricinus communis
28611.t000005 1.0kb upstream 1.0kb upstream 5107 true 28611: 72961-78067 Ricinus communis
28611.t000005 1.0kb upstream 1.0kb upstream 1000 false 28611: 77068-78067 Ricinus communis
28611.t000005 1.0kb downstream 1.0kb downstream 5107 true 28611: 71961-77067 Ricinus communis
28611.t000005 1.0kb downstream 1.0kb downstream 1000 false 28611: 71961-72960 Ricinus communis
28611.t000005 2.0kb upstream 2.0kb upstream 6107 true 28611: 72961-79067 Ricinus communis
28611.t000005 2.0kb upstream 2.0kb upstream 2000 false 28611: 77068-79067 Ricinus communis
28611.t000005 2.0kb downstream 2.0kb downstream 6107 true 28611: 70961-77067 Ricinus communis
28611.t000005 2.0kb downstream 2.0kb downstream 2000 false 28611: 70961-72960 Ricinus communis
28611.t000005 5.0kb upstream 5.0kb upstream 9107 true 28611: 72961-82067 Ricinus communis
28611.t000005 5.0kb upstream 5.0kb upstream 5000 false 28611: 77068-82067 Ricinus communis
28611.t000005 5.0kb downstream 5.0kb downstream 9107 true 28611: 67961-77067 Ricinus communis
28611.t000005 5.0kb downstream 5.0kb downstream 5000 false 28611: 67961-72960 Ricinus communis
28611.t000005 10.0kb upstream 10.0kb upstream 14107 true 28611: 72961-87067 Ricinus communis
28611.t000005 10.0kb upstream 10.0kb upstream 10000 false 28611: 77068-87067 Ricinus communis
28611.t000005 10.0kb downstream 10.0kb downstream 14107 true 28611: 62961-77067 Ricinus communis
28611.t000005 10.0kb downstream 10.0kb downstream 10000 false 28611: 62961-72960 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain