Gene : HORVU3Hr1G113910 H. vulgare r1
Defline:  (1 of 1) KOG1048 - Neural adherens junction protein Plakophilin and related Armadillo repeat proteins Genomic Order:  5574
Name:  ? HORVU3Hr1G113910 Secondary Identifier:  ? PAC:38414546
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare PWY-7511 Hordeum vulgare pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G113910 0.5kb upstream 0.5kb upstream 6933 true chr3H: 689573848-689580780 Hordeum vulgare
HORVU3Hr1G113910 0.5kb upstream 0.5kb upstream 500 false chr3H: 689580281-689580780 Hordeum vulgare
HORVU3Hr1G113910 0.5kb downstream 0.5kb downstream 6933 true chr3H: 689573348-689580280 Hordeum vulgare
HORVU3Hr1G113910 0.5kb downstream 0.5kb downstream 500 false chr3H: 689573348-689573847 Hordeum vulgare
HORVU3Hr1G113910 1.0kb upstream 1.0kb upstream 7433 true chr3H: 689573848-689581280 Hordeum vulgare
HORVU3Hr1G113910 1.0kb upstream 1.0kb upstream 1000 false chr3H: 689580281-689581280 Hordeum vulgare
HORVU3Hr1G113910 1.0kb downstream 1.0kb downstream 7433 true chr3H: 689572848-689580280 Hordeum vulgare
HORVU3Hr1G113910 1.0kb downstream 1.0kb downstream 1000 false chr3H: 689572848-689573847 Hordeum vulgare
HORVU3Hr1G113910 2.0kb upstream 2.0kb upstream 8433 true chr3H: 689573848-689582280 Hordeum vulgare
HORVU3Hr1G113910 2.0kb upstream 2.0kb upstream 2000 false chr3H: 689580281-689582280 Hordeum vulgare
HORVU3Hr1G113910 2.0kb downstream 2.0kb downstream 8433 true chr3H: 689571848-689580280 Hordeum vulgare
HORVU3Hr1G113910 2.0kb downstream 2.0kb downstream 2000 false chr3H: 689571848-689573847 Hordeum vulgare
HORVU3Hr1G113910 5.0kb upstream 5.0kb upstream 11433 true chr3H: 689573848-689585280 Hordeum vulgare
HORVU3Hr1G113910 5.0kb upstream 5.0kb upstream 5000 false chr3H: 689580281-689585280 Hordeum vulgare
HORVU3Hr1G113910 5.0kb downstream 5.0kb downstream 11433 true chr3H: 689568848-689580280 Hordeum vulgare
HORVU3Hr1G113910 5.0kb downstream 5.0kb downstream 5000 false chr3H: 689568848-689573847 Hordeum vulgare
HORVU3Hr1G113910 10.0kb upstream 10.0kb upstream 16433 true chr3H: 689573848-689590280 Hordeum vulgare
HORVU3Hr1G113910 10.0kb upstream 10.0kb upstream 10000 false chr3H: 689580281-689590280 Hordeum vulgare
HORVU3Hr1G113910 10.0kb downstream 10.0kb downstream 16433 true chr3H: 689563848-689580280 Hordeum vulgare
HORVU3Hr1G113910 10.0kb downstream 10.0kb downstream 10000 false chr3H: 689563848-689573847 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571752 5269 Grass View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain