Gene : HORVU3Hr1G062980 H. vulgare r1

Defline:  (1 of 1) PTHR12786:SF1 - PROTEIN SDE2 HOMOLOG Genomic Order:  2900
Name:  ? HORVU3Hr1G062980 Secondary Identifier:  ? PAC:38421160

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G062980 0.5kb upstream 0.5kb upstream 6896 true chr3H: 481654402-481661297 Hordeum vulgare
HORVU3Hr1G062980 0.5kb upstream 0.5kb upstream 500 false chr3H: 481654402-481654901 Hordeum vulgare
HORVU3Hr1G062980 0.5kb downstream 0.5kb downstream 6896 true chr3H: 481654902-481661797 Hordeum vulgare
HORVU3Hr1G062980 0.5kb downstream 0.5kb downstream 500 false chr3H: 481661298-481661797 Hordeum vulgare
HORVU3Hr1G062980 1.0kb upstream 1.0kb upstream 7396 true chr3H: 481653902-481661297 Hordeum vulgare
HORVU3Hr1G062980 1.0kb upstream 1.0kb upstream 1000 false chr3H: 481653902-481654901 Hordeum vulgare
HORVU3Hr1G062980 1.0kb downstream 1.0kb downstream 7396 true chr3H: 481654902-481662297 Hordeum vulgare
HORVU3Hr1G062980 1.0kb downstream 1.0kb downstream 1000 false chr3H: 481661298-481662297 Hordeum vulgare
HORVU3Hr1G062980 2.0kb upstream 2.0kb upstream 8396 true chr3H: 481652902-481661297 Hordeum vulgare
HORVU3Hr1G062980 2.0kb upstream 2.0kb upstream 2000 false chr3H: 481652902-481654901 Hordeum vulgare
HORVU3Hr1G062980 2.0kb downstream 2.0kb downstream 8396 true chr3H: 481654902-481663297 Hordeum vulgare
HORVU3Hr1G062980 2.0kb downstream 2.0kb downstream 2000 false chr3H: 481661298-481663297 Hordeum vulgare
HORVU3Hr1G062980 5.0kb upstream 5.0kb upstream 11396 true chr3H: 481649902-481661297 Hordeum vulgare
HORVU3Hr1G062980 5.0kb upstream 5.0kb upstream 5000 false chr3H: 481649902-481654901 Hordeum vulgare
HORVU3Hr1G062980 5.0kb downstream 5.0kb downstream 11396 true chr3H: 481654902-481666297 Hordeum vulgare
HORVU3Hr1G062980 5.0kb downstream 5.0kb downstream 5000 false chr3H: 481661298-481666297 Hordeum vulgare
HORVU3Hr1G062980 10.0kb upstream 10.0kb upstream 16396 true chr3H: 481644902-481661297 Hordeum vulgare
HORVU3Hr1G062980 10.0kb upstream 10.0kb upstream 10000 false chr3H: 481644902-481654901 Hordeum vulgare
HORVU3Hr1G062980 10.0kb downstream 10.0kb downstream 16396 true chr3H: 481654902-481671297 Hordeum vulgare
HORVU3Hr1G062980 10.0kb downstream 10.0kb downstream 10000 false chr3H: 481661298-481671297 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577297 5269 Grass View MSA
122047648 5273 Angiosperm View MSA
121345169 5274 Embryophyte View MSA
123427367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain