Gene : HORVU3Hr1G048560 H. vulgare r1
Defline:  (1 of 2) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  2237
Name:  ? HORVU3Hr1G048560 Secondary Identifier:  ? PAC:38411430
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare PWY-1822 Hordeum vulgare pathologic  
Hvulgare PWY-6235 Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G048560 0.5kb upstream 0.5kb upstream 6468 true chr3H: 335668763-335675230 Hordeum vulgare
HORVU3Hr1G048560 0.5kb upstream 0.5kb upstream 500 false chr3H: 335668763-335669262 Hordeum vulgare
HORVU3Hr1G048560 0.5kb downstream 0.5kb downstream 6468 true chr3H: 335669263-335675730 Hordeum vulgare
HORVU3Hr1G048560 0.5kb downstream 0.5kb downstream 500 false chr3H: 335675231-335675730 Hordeum vulgare
HORVU3Hr1G048560 1.0kb upstream 1.0kb upstream 6968 true chr3H: 335668263-335675230 Hordeum vulgare
HORVU3Hr1G048560 1.0kb upstream 1.0kb upstream 1000 false chr3H: 335668263-335669262 Hordeum vulgare
HORVU3Hr1G048560 1.0kb downstream 1.0kb downstream 6968 true chr3H: 335669263-335676230 Hordeum vulgare
HORVU3Hr1G048560 1.0kb downstream 1.0kb downstream 1000 false chr3H: 335675231-335676230 Hordeum vulgare
HORVU3Hr1G048560 2.0kb upstream 2.0kb upstream 7968 true chr3H: 335667263-335675230 Hordeum vulgare
HORVU3Hr1G048560 2.0kb upstream 2.0kb upstream 2000 false chr3H: 335667263-335669262 Hordeum vulgare
HORVU3Hr1G048560 2.0kb downstream 2.0kb downstream 7968 true chr3H: 335669263-335677230 Hordeum vulgare
HORVU3Hr1G048560 2.0kb downstream 2.0kb downstream 2000 false chr3H: 335675231-335677230 Hordeum vulgare
HORVU3Hr1G048560 5.0kb upstream 5.0kb upstream 10968 true chr3H: 335664263-335675230 Hordeum vulgare
HORVU3Hr1G048560 5.0kb upstream 5.0kb upstream 5000 false chr3H: 335664263-335669262 Hordeum vulgare
HORVU3Hr1G048560 5.0kb downstream 5.0kb downstream 10968 true chr3H: 335669263-335680230 Hordeum vulgare
HORVU3Hr1G048560 5.0kb downstream 5.0kb downstream 5000 false chr3H: 335675231-335680230 Hordeum vulgare
HORVU3Hr1G048560 10.0kb upstream 10.0kb upstream 15968 true chr3H: 335659263-335675230 Hordeum vulgare
HORVU3Hr1G048560 10.0kb upstream 10.0kb upstream 10000 false chr3H: 335659263-335669262 Hordeum vulgare
HORVU3Hr1G048560 10.0kb downstream 10.0kb downstream 15968 true chr3H: 335669263-335685230 Hordeum vulgare
HORVU3Hr1G048560 10.0kb downstream 10.0kb downstream 10000 false chr3H: 335675231-335685230 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574004 5269 Grass View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain